FastQCFastQC Report
Sat 11 Jan 2025
HJW2KDRX5_n02_GT1_ST.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHJW2KDRX5_n02_GT1_ST.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6880420
Sequences flagged as poor quality0
Sequence length71
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTGTCAAGATGCTACCGTTCAGAGTGGATGGGATAAGTGCGTGATGGACCGAAGGGACCTCGTGGCCGGA289981742.14593004496818No Hit
GTTGTCAAGATGCTACCGTTCAGAGATTCAAGGGCAGCCGCGTCACGATTGGATACGACTGTTGGACCGGA165522724.057063376945013No Hit
GTTGTCAAGATGCTACCGTTCAGAGCGGCTCGTGCTGCGTCGTCTCAAGTCCAGAAACTCCGTGTATCCTA6449709.373991703994815No Hit
GTTGTCAAGATGCTACCGTTCAGAGTGGATGGGATAAGTGCGTGATGGACCGAAGGGACCTCGTGGCCGAA917071.3328692143793548No Hit
GTTGTCAAGATGCTACCGTTCAGAGATTCAAGGGCAGCCGCGTCACGATTGGATACGACTGTTGGACCGAA497970.7237494222736403No Hit
GTTGTCAAGATGCTACCGTTCAGAGTGGATGGGTAAGTGCGTGATGGACCGAAGGGACCTCGTGGCCGGAA323570.47027652381686No Hit
GTTGTCAAGATGCTACCGTTCAGAGTGGATGGGATAAGTGCGTGATGGACCGAAGGGACCTCGTGGCCGGG125800.18283767560701236No Hit
GTTGTCAAGATGCTACCGTTCAGAGTGGATGGGATAAGTGCGTGATGGACCGAGGGGACCTCGTGGCCGGA121820.17705314501149638No Hit
GTTGTCAAGATGCTACCGTTCAGAGTGGATGGGATAAGTGCGTGATGGACCGAAGGGACCTCGTGGCCAGA112960.16417602413806134No Hit
GTTGTCAAGATGCTACCGTTCAGAGTGGATGGGATAAGTGCGTGATGGACCGAAGGGGCCTCGTGGCCGGA112860.1640306841733499No Hit
GTTGTCAAGATGCTACCGTTCAGAGTGGATGGGATAAGTGCGTGATGGGCCGAAGGGACCTCGTGGCCGGA110340.16036811706262116No Hit
GTTGTCAAGATGCTACCGTTCAGAGTGGATGGGGTAAGTGCGTGATGGACCGAAGGGACCTCGTGGCCGGA109570.15924899933434294No Hit
GTTGTCAAGATGCTACCGTTCAGAGTGGATGGGATAAGCGCGTGATGGACCGAAGGGACCTCGTGGCCGGA105480.15330459477764438No Hit
GTTGTCAAGATGCTACCGTTCAGAGTGGATGGGATAAGTGCGCGATGGACCGAAGGGACCTCGTGGCCGGA105380.15315925481293294No Hit
GTTGTCAAGATGCTACCGTTCAGAGTGGATGGGATAAGTGCGTGGTGGACCGAAGGGACCTCGTGGCCGGA105240.15295577886233688No Hit
GTTGTCAAGATGCTACCGTTCAGAGTGGGTGGGATAAGTGCGTGATGGACCGAAGGGACCTCGTGGCCGGA103900.15100822333520336No Hit
GTTGTCAAGATGCTACCGTTCAGAGTGGATGGGATAAGTGCGTGATGGACCGAAGGGACCTCATGGCCGGA101920.14813049203391654No Hit
GTTGTCAAGATGCTACCGTTCAGAGTGGATGGGATAAGTGCGTGATGGACCGAAGGGACCCCGTGGCCGGA100050.1454126346938123No Hit
GTTGTCAAGATGCTACCGTTCGGAGTGGATGGGATAAGTGCGTGATGGACCGAAGGGACCTCGTGGCCGGA95090.13820377244412405No Hit
GTTGTCAAGATGCTACCGTTCAGAGTGGATGGGATAAGTGCGTGATGGACCGAAGGGACCTCGCGGCCGGA92850.13494815723458742No Hit
GTTGTCAAGATGCTACCGTTCAGGGTGGATGGGATAAGTGCGTGATGGACCGAAGGGACCTCGTGGCCGGA90940.1321721639085986No Hit
GTTGTCAAGATGCTACCGTTCAGAGATTCAAGGCAGCCGCGTCACGATTGGATACGACTGTTGGACCGGAA86890.12628589533778461No Hit
GTTGTCAAGATGCTACCGTTCAGAGTGGACGGGATAAGTGCGTGATGGACCGAAGGGACCTCGTGGCCGGA83910.1219547643893832No Hit
GTTGTCAAGATGCTACCGTTCAGAGCGGATGGGATAAGTGCGTGATGGACCGAAGGGACCTCGTGGCCGGA82820.12037055877402833No Hit
GTTGTCAAGATGCTACCGTTCAGAGTGGATGGGATAGGTGCGTGATGGACCGAAGGGACCTCGTGGCCGGA81740.1188008871551446No Hit
GTTGTCAAGATGCTACCGTTCAGAGTGGATGGGATAAGTGCGTGATGGACCGAAGGGACCTCGTAGCCGGA81320.11819045930335649No Hit
GTTGTCAAGATGCTACCGTTCAGAGTGGATGGGATAAGTGCGTGACGGACCGAAGGGACCTCGTGGCCGGA81080.11784164338804898No Hit
GTTGTCAAGATGCTACCGTTCAGAGTGGATGGGATGAGTGCGTGATGGACCGAAGGGACCTCGTGGCCGGA79590.11567607791384829No Hit
GTTGTCAAGATGCTACCGTTCAGAGTGGATGGGATAAGTGCGTGATGGACCGGAGGGACCTCGTGGCCGGA77750.11300182256315748No Hit
GTTGTCAAGATGCTACCGTTCAGAGACTCAAGGGCAGCCGCGTCACGATTGGATACGACTGTTGGACCGGA76610.11134494696544689No Hit
GTTGTCAAGATGCTACCGTTCAGAGTGGATGGGATAAGTGCGTGATGGACCGAAGGGACCTCGTGACCGGA76000.11045837318070699No Hit
GTTGTCAAGATGCTACCGTTCAGAGATTCAAGGGCAGCCGCGTCACGATTGGATACGACTGTTGGACCGGG75520.10976074135009199No Hit
GTTGTCAAGATGCTACCGTTCAGAGTGGATGGGATAAGTGCGTGATGGACCGAAGGGACCTCGTGGCTGGA74680.10853988564651577No Hit
GTTGTCAAGATGCTACCGTTCAGAGTGGATGGGATAAGTGCGTGATGGACTGAAGGGACCTCGTGGCCGGA70470.10242107313216343No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)