FastQCFastQC Report
Sat 11 Jan 2025
HJW2KDRX5_n02_GT1_MULTI.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHJW2KDRX5_n02_GT1_MULTI.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences194879021
Sequences flagged as poor quality0
Sequence length71
%GC39

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA17880170.9175010172080043No Hit
CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA3365020.17267225495760263No Hit
TAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA3008470.1543762886616718No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)