Sample adapter_content Sequences flagged as poor quality sequence_duplication_levels avg_sequence_length Encoding kmer_content per_base_sequence_quality sequence_length_distribution Sequence length File type basic_statistics per_sequence_gc_content Total Sequences per_base_n_content per_base_sequence_content overrepresented_sequences %GC total_deduplicated_percentage Filename per_tile_sequence_quality per_sequence_quality_scores HJW27AFXY_n01_CCPD50 pass 0.0 fail 71.0 Sanger / Illumina 1.9 fail pass pass 71.0 Conventional base calls pass warn 52474917.0 pass fail warn 46.0 26.3096775753 HJW27AFXY_n01_CCPD50.fastq.gz pass pass HJW27AFXY_n01_CCPD51 pass 0.0 fail 71.0 Sanger / Illumina 1.9 fail pass pass 71.0 Conventional base calls pass warn 29091731.0 pass fail pass 47.0 21.2246369753 HJW27AFXY_n01_CCPD51.fastq.gz pass pass HJW27AFXY_n01_CCPD52 pass 0.0 fail 71.0 Sanger / Illumina 1.9 fail pass pass 71.0 Conventional base calls pass warn 25098996.0 pass fail warn 45.0 24.2218902824 HJW27AFXY_n01_CCPD52.fastq.gz fail pass HJW27AFXY_n01_CCPD53 pass 0.0 fail 71.0 Sanger / Illumina 1.9 fail pass pass 71.0 Conventional base calls pass warn 11833382.0 pass fail pass 48.0 25.1697321953 HJW27AFXY_n01_CCPD53.fastq.gz pass pass HJW27AFXY_n01_undetermined pass 0.0 warn 71.0 Sanger / Illumina 1.9 fail pass pass 71.0 Conventional base calls pass fail 7870100.0 pass fail fail 53.0 51.2621674994 HJW27AFXY_n01_undetermined.fastq.gz fail pass HJW27AFXY_n02_CCPD50 pass 0.0 fail 41.0 Sanger / Illumina 1.9 warn fail pass 41.0 Conventional base calls pass fail 52474917.0 pass fail fail 41.0 5.4454384985 HJW27AFXY_n02_CCPD50.fastq.gz fail pass HJW27AFXY_n02_CCPD51 pass 0.0 fail 41.0 Sanger / Illumina 1.9 warn fail pass 41.0 Conventional base calls pass fail 29091731.0 pass fail fail 41.0 4.48551427269 HJW27AFXY_n02_CCPD51.fastq.gz fail pass HJW27AFXY_n02_CCPD52 pass 0.0 fail 41.0 Sanger / Illumina 1.9 fail fail pass 41.0 Conventional base calls pass fail 25098996.0 pass fail fail 45.0 5.91143929676 HJW27AFXY_n02_CCPD52.fastq.gz fail pass HJW27AFXY_n02_CCPD53 pass 0.0 fail 41.0 Sanger / Illumina 1.9 fail fail pass 41.0 Conventional base calls pass fail 11833382.0 pass fail fail 48.0 10.4143413145 HJW27AFXY_n02_CCPD53.fastq.gz fail pass HJW27AFXY_n02_undetermined pass 0.0 warn 41.0 Sanger / Illumina 1.9 fail fail pass 41.0 Conventional base calls pass fail 7870100.0 pass fail fail 54.0 56.4660374913 HJW27AFXY_n02_undetermined.fastq.gz warn fail