FastQCFastQC Report
Thu 14 Jun 2018
HJV3MBCX2_l02n01_azbabrh-3.351000000e818e.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHJV3MBCX2_l02n01_azbabrh-3.351000000e818e.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7577717
Sequences flagged as poor quality0
Sequence length51
%GC37

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATACAC148550.014.50201345
CGTATGC5700.012.62439541
ATACACA116150.012.48751445
TACACCG7550.012.2108695
CGAGCCC6050.011.90749515
ACGAGAC6050.011.893352522
TTATACA208700.011.85238545
TATGCCG6350.011.68626343
TAATACG10850.011.6579184
CGTATCC8550.011.5716759
TAGTACG7400.011.54748445
TACACAG19300.011.5342035
CTAACGG6300.011.4728723
ACCGACC2951.7582352E-811.4334948
ACCGTCG5350.011.3480099
GTGTAAG23200.011.2960041
TTGCGAC5400.011.24293421
TCCGAGC8050.011.17376645
TCGTATG6400.010.8922440
CCGTCGT5800.010.86758110
Produced by FastQC (version 0.11.2)