HJV3MBCX2_l01n01_yw3.351000000e8059.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HJV3MBCX2_l01n01_yw3.351000000e8059.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4386232
Sequences flagged as poor quality	0
Sequence length	51
%GC	38

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAG	11038	0.25165107545610904	No Hit
CTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTC	10680	0.24348917248335245	No Hit
GAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAG	9855	0.22468031786736314	No Hit
CTTATACACATCTCCGAGCCCACGAGACTAAGGCGAATCTCGTATGCCGTC	9726	0.22173929696377212	No Hit
TCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTT	8503	0.19385659490879645	No Hit
AGACAAGACAAGACAAGACAAGACAAGACAAGACAAGACAAGACAAGACAA	5084	0.11590814165780561	No Hit
GTCTTGTCTTGTCTTGTCTTGTCTTGTCTTGTCTTGTCTTGTCTTGTCTTG	4867	0.11096084292850904	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GAGACTA	1535	31.075068	24
CGAGACT	1535	31.075068	23
CCACGAG	1605	29.999458	20
TAAGGCG	1655	29.22908	29
ACGAGAC	1650	29.18196	22
GACTAAG	1665	29.054193	26
TATGCCG	1645	28.859663	43
CTCGTAT	1635	28.760952	39
TCTCGTA	1670	28.292904	38
TCGTATG	1680	28.124495	40
TGCCGTC	1695	28.008347	45
CGAATCT	1675	27.939796	34
GCGAATC	1690	27.824944	33
ACTAAGG	1755	27.564234	27
GTATGCC	1715	27.550528	42
CGAGCCC	1795	26.82403	15
CCGAGCC	1805	26.800072	14
CGTATGC	1780	26.544466	41
AATCTCG	1750	26.485237	36
ATGCCGT	1805	26.301466	44