HJV3MBCX2_l01n01_otd-1.351000000e8114.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HJV3MBCX2_l01n01_otd-1.351000000e8114.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3867552
Sequences flagged as poor quality	0
Sequence length	51
%GC	38

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACTCCTGAGCATCTCGTATGCCGTC	21583	0.5580532595295422	No Hit
GAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAG	8753	0.22631887043794108	No Hit
CTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTC	8440	0.21822589586384358	No Hit
GAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAG	7525	0.19456751971272784	No Hit
TCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTT	6477	0.16747027577134063	No Hit
AGACAAGACAAGACAAGACAAGACAAGACAAGACAAGACAAGACAAGACAA	4183	0.10815627042635755	No Hit
GTCTTGTCTTGTCTTGTCTTGTCTTGTCTTGTCTTGTCTTGTCTTGTCTTG	3917	0.10127853484581462	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGAGACT	2675	37.597687	23
TGCCGTC	2700	37.082897	45
AGACTCC	2780	36.17763	25
CCACGAG	2775	35.999577	20
GAGACTC	2805	35.61455	24
TATGCCG	2800	35.597797	43
CGTATGC	2810	35.55118	41
TCTCGTA	2810	35.55118	38
CTCGTAT	2820	35.425114	39
ATGCCGT	2820	35.425114	44
GTATGCC	2825	35.362415	42
TCGTATG	2845	35.19291	40
CGAGCCC	2860	34.929657	15
GCCCACG	2865	34.8687	18
ACGAGAC	2895	34.585087	22
TCCTGAG	2925	34.230366	29
GCATCTC	2920	34.134872	35
CCTGAGC	2995	33.3552	30
GACTCCT	3035	33.286263	26
CCGAGCC	3045	33.02917	14