HJTFLAFXY_n02_Col_input_g-b.fastq.gz FastQC Report

Summary

Basic Statistics
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Adapter Content
Kmer Content

Basic Statistics

Measure	Value
Filename	HJTFLAFXY_n02_Col_input_g-b.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	57413167
Sequences flagged as poor quality	0
Sequence length	76
%GC	35

Per base sequence quality

Per base quality graph

Per tile sequence quality

Per base quality graph

Per sequence quality scores

Per Sequence quality graph

Per base sequence content

Per base sequence content

Per sequence GC content

Per sequence GC content graph

Per base N content

N content graph

Sequence Length Distribution

Sequence length distribution

Sequence Duplication Levels

Duplication level graph

Overrepresented sequences

No overrepresented sequences

Adapter Content

Adapter graph

Kmer Content

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGTGTAG	69095	0.0	6.4032326	70
GTGTAGG	65970	0.0	6.3510637	70
TGTAGGG	60160	0.0	6.161507	70
GTAGGGA	53905	0.0	6.05833	69
GCGTCGT	108675	0.0	6.0229707	70
GTCGTGT	92265	0.0	5.933331	70
TAGGGAA	57630	0.0	5.7639	70
AGCGTCG	118095	0.0	5.72334	70
CGTCGTG	100220	0.0	5.70685	70
TCGTGTA	86535	0.0	5.650735	69
GAGCGTC	128105	0.0	5.62313	70
GGGAAAG	48605	0.0	5.3650737	69
CGGAAGC	12435	0.0	5.2355943	70
AAGAGCG	159105	0.0	5.2183075	70
CAGTACG	6890	0.0	5.1817894	70
AGAGCGT	143000	0.0	5.152463	70
GAAGAGC	186585	0.0	5.050067	70