FastQCFastQC Report
Thu 23 Mar 2017
HJNJTAFXX_n02_minidip01_69.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHJNJTAFXX_n02_minidip01_69.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences26
Sequences flagged as poor quality0
Sequence length75
%GC40

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTAATCATCTTGCATTTTCTAACCTTCAACAAACGCCTTTATCCCAATTGCAAAACATCAATTCCAACACTTCAC13.8461538461538463No Hit
ATAATTCACCTAGCTACCCAAAAGCTTAGATGGAGATGTACTTGGAAATTAATGTTATTTTCATGGCTGCTAATA13.8461538461538463No Hit
GCAGCCGCCCGTCCCAATTTTGGCAAAATTGACATCCTAACTGCACGAATTCTCATCGCGTATCAGAACTCTTGA13.8461538461538463No Hit
GGCAACGTTGATTGGTCTGGGGATACGGGTCAGGTTAGAAAGGTCTCTTCCCCCAAGATTTAGAATTACTATTTT13.8461538461538463No Hit
ATTCGACACCGCCGAGTACCTCCTTTTGTTGCTTTGTGAGTCCTGTCTCTTATACACATCTGAAGCTGCCGACTA13.8461538461538463No Hit
CATACAAAGGAGAAGTCATGAATTCTAAATGTATCTAATAAGATACGTGAATTCAGCATCACCTAGTTATTAATG13.8461538461538463No Hit
CACTAGATCCTTTTCATCGCCGCAAAGTGACTTAAACTTCCCATCCGAATTCCCCCTGCCTTCTAACAGTAAAAA13.8461538461538463No Hit
TCTTCCTAGCTATCTAAATATCAACTTGCAGATTCTACTAAAGGAATGTTTCCAAAATGCTGTATCCACACAAAG13.8461538461538463No Hit
ATCATTCTATGGGCTGTTTAATTTGGGAGGTAAAGAAGCAACGGAAAGGCAATTGAAAATCCAATTTCAAACTTT13.8461538461538463No Hit
GCATTACAGTGGTGCCACTTGGTCCTCCTCGAATTTTGTAGATAAGCCATTTTGCATGACATTTTCTAAATCGTC13.8461538461538463No Hit
GGTATATACTGTAGCATCCGTGTGCGTATGACATATCAGTAGAAGTGAAGGTGAGTGTGGCAAGTGGCGGTGGTG13.8461538461538463No Hit
CTCCTGGTGGTGCCCTTCCGTCAATTCCTTTAAGTTTCAGCCTAGCTACCATACTCCCCCCAGAACCCAAAGACT13.8461538461538463No Hit
AGTTTAAGTTCAGAGCGGTTGTGGGACTTGCCCAAGGTTTAAGTTCAGAGTGGTTGTGGGACTTGCGGAGGGTCG13.8461538461538463No Hit
GCTTATATGACCTTACTTGCATAAATAGTATACCCAGTACCTGGTATGGAAATAACATATAAATGATTTACAAAT13.8461538461538463No Hit
GTGCTGGCGATGGTTCATTCAAATTTCTGCCCTATCAACTTTCGATGGTAGGATAGTGGCCTACCATGGTTTCAA13.8461538461538463No Hit
TCCAAATATAAAGCTCCAATAAAAGATTCGAATAAATCGCAAAGCAAAGCTGGTCTTTTACGACCATCCATTCGT13.8461538461538463No Hit
GTCCCTGTGCCTGGAACATGGGGAACGTGTTAAGAGATCACTCAATACTTGTTGAATAACGAGGAGTTGAAATTA13.8461538461538463No Hit
TGTATTTGGTCAACCACACCAGCCATATTTGTGCTATAGTTTATGTCAGTAGGATCTAAGGATCTACTTAAAGCA13.8461538461538463No Hit
AGCGTTCATAGCGACATTGCTTTTTGATTCTTCGATGTCGGCTCTTCCTATCATACCGAAGCAGAATTCGGTAAG13.8461538461538463No Hit
CATCAACAGATAAGGAGGCATTTAGCTTGGATTCTTCGGTTATCAGAAAACAATTACAGGACTTCTTAGACCGTG13.8461538461538463No Hit
CATAAACCTAAGAAGACATTGAATCCCATTCACTCCTTAACATTCCTTAATATACATTCATGAGCTACATAACAT13.8461538461538463No Hit
AAAGTATATCTATACCTATTTGATTTTTGTGGACATATTTCAGGAAGCAGATGCAGATTTCCTGGTTGTTTTAGT13.8461538461538463No Hit
CCTTTGAAAGAAGTTACATTTCATTCCGACGCCTGCCATAGAGTGCTTCGTAATGTAAGCTATCAACATCTGTAG13.8461538461538463No Hit
ATTCGTCGTAGCTCTTTTTCATTTTCCTGCTCACATTCAATGCTTAGCACTTTCAAATCTGGTGGTTCCCCATTG13.8461538461538463No Hit
GAGCCATCACATAACAACGTGACAAATCATTAATCCCAGCGAGGGAGGAAATATTATGAGCAAGGTGACTTTGAC13.8461538461538463No Hit
TATCTAAGTGTGGGGCTCAGCAATGGGCATTTAGTAAGCCCCATGCACACAGGAGTCTGAGAGAACTTCTGCCTT13.8461538461538463No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers