FastQCFastQC Report
Thu 23 Mar 2017
HJNJTAFXX_n02_minidip01_65.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHJNJTAFXX_n02_minidip01_65.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences124
Sequences flagged as poor quality0
Sequence length75
%GC38

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CATTTGTATCTTACTGATAGTATTTTATTATATTGGGATTGAAGATGCCAATATTTCTGTGTGACTATGCAAAAA10.8064516129032258No Hit
CATAAAGATTCTCCAAGTCCCCAGGAGATTAGCTAGATACAGAGTGCCCATTGGTGCATCGACAATCCCTTAGCT10.8064516129032258No Hit
GTCTTTTTGTCTTTTTCTCAACCTCAGTGGTACCCTTGCTTCCCTCATTGCATTAGGTGCATCCCACTGAATGGC10.8064516129032258No Hit
GAATGAATGTGCAGTCGTGATGATTACAGCAGTGGCCTATGCAGGTGGCTCCTGAGAGGGGGTCTTGTCTAGCCC10.8064516129032258No Hit
GTCTAAGGGAACGTTCAACTCTGTGAGTTGAAAGCACACAACACAAGGAAGTTACTGAGAATTCTTCTGTCTAGC10.8064516129032258No Hit
GTACTAACCAATGTGGTTACTTTTTTATTTTGTTTTATTTTATTTTTGGCTGAGTACGGGGACTTTATGATGGTA10.8064516129032258No Hit
CTATGGTGGTGGGAGTAGGTCCCAAGATCTTTTTGTTTTCTAAATGTTTCTGTTTTCTAGCATTCTATCCCTGAT10.8064516129032258No Hit
AACATGTCTTGGCTTAGTTGTTTTGCTTGGTTTTCTAAAGAAGCAGCTTCTCTGGATAAGGTAGAGGATAGTTAA10.8064516129032258No Hit
GGTAAGATGTGGACCTAGTGGTGCTGTGAGAAACAGGCCCCCCACCAACCTTGGGCAGGGAAAGTGATGTGGTCT10.8064516129032258No Hit
GTTTTTTTTTTTCCAGTAGAATTTTTTGCTTATGTTTAAGGATAATTTTTTGGACATTCAAATCAAACCAAAGAG10.8064516129032258No Hit
AGGGATTTCATCCAGGGAATATTTGAGACTAAACAGGTGTAGCCTTGTAAGGATACAAATTTGCTCAGCTGAAAA10.8064516129032258No Hit
GTATACAGATTCCTCCCTTCTGCCCATTGTAACATTGTTGTCATTAATTTCACTTACCTATAAGCTGTAATCTGT10.8064516129032258No Hit
ATATAGATTATATACTGTACATTAAGAACCAAAGTACCCCAAATATATATTTTATACTGTACATGAAATATCAAA10.8064516129032258No Hit
AGTCTTGATCAGGAGCTTGGACTCGGGGAGCAGCTCCCGTTTTCTCTTGGAGACTGTGGGCAACTCAGAGGTGGG10.8064516129032258No Hit
TGTCATTCTACAAACAGTAATGTCATTAATATTCTATTTTTAGTTTCCAAGGGAAGATCCTAAACATAACAAATC10.8064516129032258No Hit
ACCCAGCTCATCAGTTCCTAAAAGACCCTGCTCTCCGCAGAGGTTCCCATTCAAGTTTTCTTGCTCATTTTATTA10.8064516129032258No Hit
TTTCAGAACTGCTCTATCAAAACAAAGGTTCAACACTGTCAGTTGAGGGCACACATCACAAATAAGTTTCTGAGA10.8064516129032258No Hit
CCGTATACAAATATCAACTCAACATGGATTAAATACCTAAATCTAAGATGTGAAACCATAAAAATTTGAGAAGCT10.8064516129032258No Hit
ATCGAATGCAATCAAATGTAATCATCGAATGGACACGAATGGAATCATCATATAATGGAATCTAATGGAATCATA10.8064516129032258No Hit
GACTCTTCCCATGAAGATTGCCTCTGACTGGACAGACTTGAGCCACATGATCATCTCTGAGCCTGTCTCTTATAC10.8064516129032258No Hit
GTTTACTAGACAGATAAATATAAAGACAAACAAATGCTTATAAACATAGATATATAGATGAATAAATAGAAAAAT10.8064516129032258No Hit
GTGCAAGCTGTGGATGCAGAAAAAAGTAGCTGGATTGTCGATGGATTCTGAAGGTGGAGTCAAGAATTTGGTCAT10.8064516129032258No Hit
GGTTATCAGCTGGCTAGACACAAAACACACCAAATCTAACAGTCCTCCTAAATATCAGCCGTAACCCACTGGAAA10.8064516129032258No Hit
GTCAAGGCTATTCTGCAGAAGCTAGGGCCCTTTATCAAATAACTGAACACTTAAACCTGTCCTAAGAGTTGGAGA10.8064516129032258No Hit
ATTCTAAATTATACATTAATTTTTTTACATTAAAAAACTCACTTTTATGAAAACCCAAAGAGTAAATCCACATTT10.8064516129032258No Hit
ATATAGATTGTGATGATTCTCCCAGTCTCAGGGAAAAAAAGAATATCCAGTTATTTCAAGAACTATGACGCTAAA10.8064516129032258No Hit
GCCCCCATCAGGCCAAGCCTGGGAAGAGCATCTCTGACTCCAGTAGGTCCCTGGCTGCTATAGCAGCATGTGCTC10.8064516129032258No Hit
GAAACACTTATTTTGTAGAAGCTGCAAGTGGATATTTGGACGTCTTTGAGGCCTTCATTTGAAAAGGGAATCTGT10.8064516129032258No Hit
TTTTCCCACTCACCTGGGGATGAGGTGAGTCATTGCAGGGAGAGGGAGTGAGTCTGGAAGAGCGGGGAATCCAGC10.8064516129032258No Hit
GTCCAATCGATTCTTTGAAATTGAAGAATGACTTGCTGTAGAGCATTGTGCTCCATGATGGTGTGTTCTGCCAGC10.8064516129032258No Hit
ACACCTGTTTATTTAGAAATATATATGTAATGCAATTACCTGATTGAATATTTCTTTCTGTATATGCTTAACTTC10.8064516129032258No Hit
GTGTATATGTGCCACATTTTCTTAATCCAGTCAATCTTTGATGGGCATTTGGGTTGTTTCCAAGTCTTTTCTATT10.8064516129032258No Hit
GTCTGGCTCTGTTGCCCAGGCTGGAGTGCAGAGCCAGACCCTGTCTCAAAAAACAAAAAACAAGCAAACAAACAA10.8064516129032258No Hit
GCTATAAAGAACTGCCCAACACTAGGTAGTTTATAAGGGAAAGAGGTTTAATTGACTCACAATTCCACAGGGCTG10.8064516129032258No Hit
CCCATAAACCCATCATAAATCAACAATATATGAAAATGTAAGTTGCAAATGCACTTAATACCCTGGTAAATCCAT10.8064516129032258No Hit
AGTATTGTCAGAGCTTATCAAAAATGAGCTGACTTACAAACTATCAATGGATTTAACTGTATGATCTAATATTCA10.8064516129032258No Hit
TCTTGGAGGCTTTGTTCATATTTTCTAATTTTTTTTTCTTTGTTGGATTGGGTTAATTTAGAGACCTTGTCTTCA10.8064516129032258No Hit
TATCAGAAAGTAATTCCTTTAAATTTACAATTTGTTCTAAACCATATTTTTCTAAAAAACTATAATGAAAATCAT10.8064516129032258No Hit
AAGTGGTACTAATAGAAAGGTTAAGTCCCCCTATTTTAAAATAATGCTGATAGAATGATTAAATTGGCCGCTTGA10.8064516129032258No Hit
ATTCTTTTGTGTATTCAAGTATGGGGATCCCTATCACCATCAGACTAATAAACCTATTCTGTCACATTCTTATTT10.8064516129032258No Hit
TAGCAGAAAAGCTCTTTAAATGCTTCTCACAAGCTGTCATTTGTGCATTCAGAAAACCATTAGGACTTCCTCCTT10.8064516129032258No Hit
ATTATACAACTAAAAAATTAAAATCAGATTATTGGAAACTGTACGGTGTTGATGCTGTCTCTTATACACATCTGA10.8064516129032258No Hit
CTGAAGGCCTTCTTTGTCGTTAGTACAAAATTAACTTTGTGAACATTCAGGTATTTACTCTTTTGTCTGCCAGTA10.8064516129032258No Hit
CACAAAGTGAGCACGTGTACAATTCCAGTAAACACACTGTGCATGCAGCCCCTACCACTGTCTCTTATACACATC10.8064516129032258No Hit
GGACTCAGTCTATAATTCTTCCCAAAGATACTAGTTATTATGCTTTTAATGTACACAGAACAAACACTGTCTCTT10.8064516129032258No Hit
CTCTCAGATATTTGCAGTACATAATAGTACATACTAGACTCTGAAACATCCTATAGTGAAGAAATCTGTTGAATC10.8064516129032258No Hit
GTTTAATCCACAAGCTTTATATAGCTTTAGTTTAAAAAAAATCAAAACAAAAAAAAAAAAAAAAAAAAAAACAGT10.8064516129032258No Hit
GTGGAGGAAGGAAGGGTTTGTGAATACCTTATTTCCCCTGCTGCACACTGTATAAAGCAAAATCTTAGGGCTGGA10.8064516129032258No Hit
ATCATATAGAATAGGCATGATAAATCAGAAATAACTTTAGTTATTCCCATAATCAGAATGATATGTAAAATTTCA10.8064516129032258No Hit
GAAAAGGTTCACTATATTTCCTTCTTAAATATTAAAAGTTACTTTAGTTGGCACTACCCTAAAAAAAACAAAAAT10.8064516129032258No Hit
AAAGTATAGAACACAATAAATTACTGTCTTTTAAACACATTTTAAATACAAAGCAGATCAATACAAATTTACATA10.8064516129032258No Hit
CTTCCTTCTTTATCTTGATTCACTCTACTTCATCACTCACGGTCCTATCATCAGAGCTTGTTTCCACAAATCTAT10.8064516129032258No Hit
TTTTTTCCCTTCACTCTTCTGCTATATGTCCTCGCACTTCCTACCTTCTTTTTTTCAGGGGAGTTCTTGGTAGAC10.8064516129032258No Hit
AAATATTGCTGGGATGACTGGCTAGCCCTATGCAGAAGATTGAAACTGGACCCCTTCCTTATACCATATACAAAA10.8064516129032258No Hit
GTCCTTCACATCCCTTGTAAGTTGGATTCCTAGGTATTTTATTCTCTTTGAAGCAATTGTGAATGGGAGTTCACT10.8064516129032258No Hit
CCTCCATTATGTCTGCTGTTTAAGCTCCCACATATGAGTGAGAATATTTGATATTTGTCTTCCTCTGCCTGGCTT10.8064516129032258No Hit
GCATGCAAGTTAGCAAATGTCTGCGGCACCAATATCCGTGTTCTGATTCTGTGTCCCAATGAGGGTCTACACTGG10.8064516129032258No Hit
ACAAACACACATTTATTTGTGGTCGTGATCACAAAATCTATTGGACTTCACATAGGAGAGGTCCTCAGTGGCCCT10.8064516129032258No Hit
TATCTTTATTTGTACTTTCATTTTGTTATGTACCCAGTAGTCATTCAGGAGCAAGTTGTTCAGTTTCCATGTAGT10.8064516129032258No Hit
GTCCAGCTGACACCATGACTTCACCCTTCAGACCTGTGAAGAAATAAAGAACTTGCTCTTCAGGAGTGGACCCTG10.8064516129032258No Hit
CCCTAGTGGTTTCCATAAAGGTGGGCCCCATATGGGCATCTCTTTAAGAGGCCACTTTTCCATTGCTCTTCTGCC10.8064516129032258No Hit
GACATATACATCATTTTTAGTATCTCTATTCTGTGCCATTAGTCTTGTCTATCCTTGAACCAATACCACACTTTC10.8064516129032258No Hit
TCAGATATCAGATAGCAATATTTTGCTTTATGGCATTTTGCTAAGCTATGGTTTCCAGAGTCACTTCAGTATGTT10.8064516129032258No Hit
TCTCTGCTCTGCTCAAAACCCTCTAGTGGACCCCAGCTCACCCTGTCTCTTATACACATCTGACGCTGCCGACGA10.8064516129032258No Hit
CTTTTATAGTAAGTATTAACAAAACTCTGCGTAGATATGAAATTGGCAGTATAATCCTAGAGTGTTTTATGTAAC10.8064516129032258No Hit
TTGCACAGCTCTGTTCTTGGGCCCCAAGGCACTGGTGGCGTGGGCTCACCAGGGGATCTCCTGATCCACAGGTTG10.8064516129032258No Hit
GAGAGTCCCAATCTAGACTTTCAGCCAAGAAAGAAGACTACTCATGAACAGAAACTGCAACAACCAAAGTGTACA10.8064516129032258No Hit
ATATTGCATTATTTTGCTTAGCATTTGCCTAGTATATTTTCCCATCGTTTTAACATTTCTGTGCTGCTATTATTA10.8064516129032258No Hit
ATTAGAACTGCTTTCATTAGAAAAGGTTACCATCAGAGTTGAATCAGAAATTGTATATGTGCATAAAAATCTTCA10.8064516129032258No Hit
TATGGGATCCCCTGGTGTTATTCAAGATTTAGGGTATTGCACTTAACATGATGTAAAATACTTGAGAACCACACA10.8064516129032258No Hit
CTCATGGATGAGAGAGATGAGCAAAGGAGACACCATGAGCAAAGGCAATAAGTAGAAAATGTGCACGGTCTCCAG10.8064516129032258No Hit
CCCAAATGCCTTTCGCATTGCCAAGCTGATGCTTTACATTTTTGTCGTCATCCATTGGAACAGCTGCCTATACTT10.8064516129032258No Hit
AGCTACAGGCCCAGTGCAAGACTGAAACCCAGCAGGCCAGTCACTAAAACTTAAAGCTTTAAAATAATCTCCTTT10.8064516129032258No Hit
ACCACATTCTCTATTATAAAAAGTAGTACCTCTCATAGTAAAAGCCTGCTCTACAGTTACAGTTTTCGTTTCAGA10.8064516129032258No Hit
GGACTCAATGATTGCAAGCACAGGGTTTGGGTTGCGGGTTCAAGGCCTGGCTCCCCGATTTGTGGCTCTGTGGTC10.8064516129032258No Hit
AAGCGTGTGAGTACTTTTTAAATTGTTCCCAGTCTTAAACAGACATTGTTTCTTTTTTCCCCTATGAAATAATGA10.8064516129032258No Hit
ACAGTGTAGACAACTCACCTTATTATGCCAGTCCCTCCTCCCACCGACACGGTGAGAAGGCTGTTACCAGTAACA10.8064516129032258No Hit
CTTCCAGCCCGAAGAACTGGCCGAGCTACTTCACCTTCCGAACGACGTTGAGACCCTGGGTTGGCTATGCCTAGG10.8064516129032258No Hit
GATCAAGGCTGCAGTAAGCTAAGCCACCACTGTACTACAGCCTGACTAACAAAGCAAGACCCAGTCTCAAAAAAA10.8064516129032258No Hit
GTTTTACCCAGGTGACAGTATGCCCAGCTAAAAAATTAGATCCTGTTGATGAAAAGAAGGGGAAATGGATATTTG10.8064516129032258No Hit
CAACAATCTATCACACACAGTTGCATCTGCACACATGTACACATGTGTCATTGACTTACCCCTTTTAAGGAGCAC10.8064516129032258No Hit
CTGTCACCCGAGCTGGAGTGCAGTGGCAAGATCTCAGCTCACTGCAACCTCCGTCTCCCAGCTTCAAGTGATTCT10.8064516129032258No Hit
CTTTTGCAATGTGATGAGCTGCCCCTGCTGCATTTTGTCAGATCAGAGTTTTGCAACAAGGACTCTCTTAAAGTG10.8064516129032258No Hit
GGCATTCACCTTTCTTTGGTGCCTCGTTAAGTACCTTAATAATACACCTTCTGAATTCTTTTTCTGGTGATTCAG10.8064516129032258No Hit
GTGTTGAAATGTTAGTTTCAGTGTGTTTGTTCCTCATGTACTCAGCCAATATTTTCTGAGCACCTAACGTTTTCA10.8064516129032258No Hit
CCCTAAATCTGAGGAATGAATTTAATAGAAGTTCTCCCATGCCCAAGATAAACGAGGTAAAATAGAGACATATGA10.8064516129032258No Hit
CTATATTTGAATTTTAATGAGAATTCTTAAAAGATGAAACTAGTGGAGAAAGATTGTAAAACCTAAAAGATTTCT10.8064516129032258No Hit
GAGATTACATGTGTATGTCAAGTCCCTAGTATAGAATGTGGTTGAAATTGTAGCTATGAAGCATGGCACCCATTT10.8064516129032258No Hit
TAGTATCAATATTAACAGGAATTTGGAAGAAGTGGATTTCAGTCCTCATGGATAACTGAGGGTTTCAAGACTTCA10.8064516129032258No Hit
TGATAGTTCAGCTTTGAAACACTCTTTTTGTAGAAACTGCAAGGGGATAATTGCACAAATATAGGATTAACGTAG10.8064516129032258No Hit
TAACAGTGTGTTATAACCTGGAATTAGAAAAAAATTTCTTATTTCAAACTTGGTTGGAAATTTAGGAACAAAATA10.8064516129032258No Hit
CTCTCTCGCTCTGCCACCAGGCTGGAGTGCAGTGGCACAATCATGGCTCCCTGCAGCCCTGACCTCCTGGGCTCC10.8064516129032258No Hit
ATATTTTATTCCAGGCACTTATGACTCACCTAAACTATTTTAGTAACCTAGGATTGATGGCTTTAGTCTTCCCTC10.8064516129032258No Hit
GAAAATATGAAATAAGATGATAGTAATGAGTCCAAACATGTCAATAATCACTTTAAATATGAAAATAGTAAAATA10.8064516129032258No Hit
GTTCATAATTCTAGAGATATTTTATTGCAAAAAAATCAGAAGGTGAAGGATCATGAAATTCAAATCATAAGCTTT10.8064516129032258No Hit
GTGTGTGGCTTTCCATTGTGTGAAGGCAAACAGCCCCAGTTCAGGTCGGTGACATGTCCTTCTCATAGAGATGTG10.8064516129032258No Hit
GGCTACCTTGAGCCAGTTCTGTGTTTAAAAATATAATAGACCTAGGTGTTGGTAGCAGTGTCCTAAGCTCAGAGC10.8064516129032258No Hit
GAAGAGAAAATCAAGAGTTAATCTCTGCAGGAAACTGGGCCTAAGGTTCCCTTATTTGATTGATGTTTGTATTTT10.8064516129032258No Hit
AATTTCCACAGAACCTGGGAAACACCATTATCAAGGGTCCAAAGTAGACATTTCCTCACATACCTGCTTCATACG10.8064516129032258No Hit
GATTAATGGTTTCATTTGTTTATGAAAATAACTGACCAAACATATTTTTCTAATAATAGGCTCCCCACCTCTGGT10.8064516129032258No Hit
GTGTAGCTCCTTTCTGCTTGTATATAAAGTACCAGTCACCCATTCCCTAACTAAACAGATGTAAAAAACTACTGG10.8064516129032258No Hit
CTTTAAGAGAACAAGAAAGTCAGTGCCTGAGATATCTCAGAAACTGAGATGGAATAACTTTCTTCTACCACACAT10.8064516129032258No Hit
GTCCAGACCTTAGTTTACACAGTGTATTCTGAAGCATATCTATAAGCCCTGTCTCTTATACACATCTGACGCTGC10.8064516129032258No Hit
GGGCAATAGAGTGAGACGCAGTCTCAAAAAAAAAGAAAGAAAGATGACGAGGCAACTTTACACCTGCTGGGAGTC10.8064516129032258No Hit
CTCAGGAAGTTAGGCATATTTCTTAGGTTAGTTTTCATAGGATTCATTTTAAGTGACTCTATATATAATCTTAGA10.8064516129032258No Hit
CTGTATGATATTTTAATGCAAAGATACCATGTGTAATAATCAAATCAGGTTAATTAGTATATTCATCACCTCAAA10.8064516129032258No Hit
GTACATAAGGCCCTGCTGAGAGCCCTGAGGTGGAGGGCATTTGTGGAGGGAGGGAAAGAAGTTATCTCATCTTCC10.8064516129032258No Hit
ATTATGTTCATCTCCATTATAAGGAAAAGTAAGAGCCAGGATCCCTACTGCCTGTCTCTTATACACATCTGACGC10.8064516129032258No Hit
GGTGAAAACTATTTCCTGATTTAAAGTTGGAAACTGAAACCCAGTGAAAAGAAATCCTACATGCTCAAAGTATTT10.8064516129032258No Hit
TCATACAGGGATATAAGGAGAGGCCTGCCACACCTACCACCACTGGTATATATGTGCTGTCTCTTATACACATCT10.8064516129032258No Hit
AGTTAGTAGAGGATAAAAATTGAGACAAAATTTAAAAACTTAATTTATTGAAAAGAAGGCAAGAATGAAGGGTGC10.8064516129032258No Hit
ATATAATAATGAGCCTTCATGTATCCACCACCCAGGTGCAAGAATAATTAACAAGGGGCCAATCTTGCTTCCTCT10.8064516129032258No Hit
ATCTGATGGTTTAATAGAATGATTTCCAAGAAGTTGCAATAACTACTAAGAGGCTAAAACACAGTAAGGAATTTC10.8064516129032258No Hit
CAATAAACCTCTTTCTTTTGTAAATTGCCCAGTCTCGGGTATGTCATTATCAGCAGTATGCAAATAGACTAATGC10.8064516129032258No Hit
GTATAGAGAAGAGACTCCATCCTGGCAGATCAGAGACATGGTAACCACTGTCTCTTATACACATCTGACGCTGCC10.8064516129032258No Hit
TCCTAATACAAAATGGCTTCAATGATGAAGAAGATGTTGGTAAGCGGCAAATTTATTTGTAGAATGGCCTATGGG10.8064516129032258No Hit
GTGTAGAGGTGAAGTCTGGGCTTATAGGGTATTCATCAGGTGAATAAGTATACATTATACCCATTAGGAATTTCT10.8064516129032258No Hit
ACTTTATATTTCCCTGAAGGAAAAAAAGCAAATTAGGTTTTTTTACAAGGCCTTTAATTAATCCTTTTCTATCAG10.8064516129032258No Hit
ACTAAGTATTCAAAGACAAGCTCATATTCACTAGAAGTTAGAGATGCAAAAAGTTTTAAAAATATGCAATACCAC10.8064516129032258No Hit
GAATAAAAATGATTACAAACATATATTATAAACAATGGTATATCAGCAACTTAGATAACCCAGATGAAATGGACA10.8064516129032258No Hit
GACCAGGACAAGCATGCATTTTGTTCAAAGAATTTATAAGTGTGGAAGCTTTTACTTAGAAATCTGTCTCTTATA10.8064516129032258No Hit
TTTTAGCCCCATCCCAAGAGCCCCGTGGGACATAGTGGAATTGACTGGGCAGTCATTTGCATAACCAGGTTCTAT10.8064516129032258No Hit
ATATTTTATTCTGTACATATAATATCAAAGTACACCAAATATATATTATATACTGTAAATGAAATATCAAAGTAA10.8064516129032258No Hit
CTCCCAACAAATATTCCCAGAACAAGACAAATTTCCCAGAATTTCAAATTTTCTGTTGTTTTCTCATGTTATCAC10.8064516129032258No Hit

[WARN]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers