FastQCFastQC Report
Thu 23 Mar 2017
HJNJTAFXX_n02_minidip01_11.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHJNJTAFXX_n02_minidip01_11.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1358
Sequences flagged as poor quality0
Sequence length75
%GC43

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG70.5154639175257731No Hit
GATATAGCTCTCCTAATTTTGTTTGAATCCCCTTATTCCTAGAACCGAACTACAAGCCATGGATGTTAGACCCTG30.22091310751104565No Hit
GTTTTGTTCCCTTGCTGGCGAGGAGTTGCAATCTTTGGAGAAGAGGCATTCTGGTTTTTGGAATTTTCAGCCCTG20.14727540500736377No Hit
GTGTAGGAGTTCTAGGAAAGCTGGTAAAAATCAAGAAAGAGGATACAGGGCAATTAGCACAAACTATCCCCTCTA20.14727540500736377No Hit
ATCTTGGCCACTGCAACCTCCACCTGCCGGGTTCAAATGATTGTCCTGCCTCAGCCCCCCAAGTAGCTGGGACTA20.14727540500736377No Hit
GTGCCAAAGAATATTAATGCAGTAGACAGTTGTGAAATATTTTCAGAATAAACAAAAATGCAATTCTCTGCTTTT20.14727540500736377No Hit
ACAATAGCCTTTGCAGTTAAATCACCATACTTTTCGGTATGCATAATTGGAACAATTTCATGGTCAATCCATTCA20.14727540500736377No Hit
GCCCTGGAGAAGGGCACGCTCGAGCTGAAGTTCGACCCCGAGGCCGGCGCCTTCAGCGTCTGGCACTACGAGCAC20.14727540500736377No Hit
AATCAACATCAAACGGAATTATCGAATGGAATCGAAGAGAATCATCGAATGGCCACGAATGGAATCATCTAATGG20.14727540500736377No Hit
GGCATAAAAACTGGCGTTCAACTCCACAAATGGCCTCTGCACGAAATCTCAGCCCCAGCACACACCAAGTGCTGT20.14727540500736377No Hit
TTGGGAGACTGAGGCAGGAGAATTGCTTGAACCTGGGAAGCAGAGGCTGCAGTGAGCCAAGATTGTGCCACTGCA20.14727540500736377No Hit
CTGGAAAATGAAAAGAGAGGCAGATGGAAAAGCTGTTTTGACGCTGTCATGTCTGGTTTTAAGACTATCCAGGCT20.14727540500736377No Hit
CATCAAAGAGCTGATCTACTGTGATCAAGTCGGCTTCATCCCTGAAATGCAAGACTGGTTCAACATACGCAAATC20.14727540500736377No Hit
AACTATAACACATTGATGAGATATTAAAGCAGACACAAGTACATGGAAACATATCCTATGTCCATGCACTAGAAT20.14727540500736377No Hit
TCATGCGAGCGCCGCCGCCACCGAGGGAGTCAACGCCGGAAACCTCGCGGGCTGCAATGCCGGCGATCTTGGAAA20.14727540500736377No Hit
CTGGCTCTCTAGGTCCAGCAAAGTCTCCTGAGACCATCCCCATGCCTAAACCCAGCACCATGCCCTACACTTAAA20.14727540500736377No Hit
GTCTCAACCCTTCCAGATCCGCTGCCTCCAAGCTCCTGCCGGCGCGCAGCTCAACACAGCCACCTCCGATCAGTT20.14727540500736377No Hit
TACATGGACTTTAAAAAAAAATCAGAGCCTAGACCCTACCCCAATAATTTTTAATTTAATAGTTCAGGGATGGAG20.14727540500736377No Hit
AAAATACTTAGGAAAAAAGTAAAGACTAATTATTAAAATAAGGTAAAACTCTGAGAAAACCATAATCAATTTTGG20.14727540500736377No Hit
TATCAACAGAGAAGCTAAGGAAATACTGAAGTCGAAGGATAAAGGATGATTCCCTCCCTGTAATGGCTTTACTCT20.14727540500736377No Hit
CAATAGTTTTTTGGGGGAAAAGGGGTGTTTGGTTACACAAATAAGTTCTTTAGTGGTGATTTCTGAGATTTCTGT20.14727540500736377No Hit
GCTGAAAACACAAACACATTGTATAGCTGTACGAAAATATTTTCTTTGTTTATATCCTTATTCTATACGTTTTTC20.14727540500736377No Hit
TCAAGGCGAAGAACCCGACGGCCTCCCTCCAGGTAATCAATACTGGTGTCGTCGCCCCGTTCGTGCTGAATATGA20.14727540500736377No Hit
GTGGAAGGCCTCGCTAGAAATCGGATGTGGATCAGGAATTCGACTTCTTGATGTCGGTAGTTAGGCCACTAAGTA20.14727540500736377No Hit
TTCCAACAGTATAGCACACAATGCTTTCCATGTGAAATCAGATAATGGGTGTTATGTATTTTTTAGAATTGATAA20.14727540500736377No Hit
GTCACGAGATGAAGATGATCGTTGACCTCATCATCGAAGGCGGTATCTCCAAGCTGCGTTGGTCAATTTCCGATG20.14727540500736377No Hit
ATATAACAAACCTTCACATGATCCCTAAACCTATAATAAATGTTTTCTTTAATAAATAAAATAACTATAAAGGCT20.14727540500736377No Hit
AAACTGTACCAGCCCTGGGTCCTGCAAGAAATAGATGGCATACTCACCCAGACTGCATAATTGAGGAGCTGTCTC20.14727540500736377No Hit
AAATAGGACTGTTAAACTTTCAACAATGGGGCTCTTTTGACTTGATTACAAAAGAAAAGGAAATGGCCCAGTTTT20.14727540500736377No Hit
ATTCAGGGACATCTGCTGTTGGAGATCCTGTGAAATAAATTAATTTGTGATTTTATCAGCCTGCACATGTAACCT20.14727540500736377No Hit
GTTATTGCCGGGTTTTTAGTTGGGAGAGCAAGGTATACCAAGTCAATCATGCGAGCGGTCGCGGTTCCTGCGCTA20.14727540500736377No Hit
ATGAATGCATTCATTTGGCCAAAATAACTTTAAAAATTTAAAAAAGAAAACCTTTACTCTGATAGAGGAAACTTA20.14727540500736377No Hit
CTAATATTCTGGACACCAAAGTTCCTGGTCCTGTGAGTGAAAGGGAGATGTAGTAATGCCATGAGAATTCCTAAT20.14727540500736377No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.2)