FastQCFastQC Report
Thu 23 Mar 2017
HJNJTAFXX_n01_minidip01_69.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHJNJTAFXX_n01_minidip01_69.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences26
Sequences flagged as poor quality0
Sequence length75
%GC39

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GAACAGTAGCCTTTAAACCTCTTGCAGATGCCCTTGCTGCTAGTCTCTTTGCCAAGTTTGCAGCATTACAACCGT13.8461538461538463No Hit
GAAGAGAAAGGTGGACTGTAATAAAATCACCTTTCGTGCACGCTAAATCCAAAGAGAATTTTGAAAGACATACAC13.8461538461538463No Hit
GTCAGATAGATACTGATAATCACTCTCACGAAAGTGGAAACACTACCAATAACGAAACAGATGAAAATGAGAGTT13.8461538461538463No Hit
GTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTT13.8461538461538463No Hit
TCACCTCTTCTGTTCAGTTACTATTTTAGACCTCAAGGATCCAATGATCTGGGAACACAGTTCATCTGAGGATAG13.8461538461538463No Hit
TAGTAATACTCGTCTTCTAATGGCTTGCCAGACGCATCTTTTCCTTCACGCACAATAATACCAATGCAAGAAATA13.8461538461538463No Hit
GGGCAAGACTCTGTCTCAGAAAAAAAAAAAAAAAAAAAGGAGAGAGATATACACCCAAGCAAGAAGACCTTTGGA13.8461538461538463No Hit
ATGCTTGATTTGATGTATCCATTTGGAATTTGTGATTTTTAGGGCAGAGATTGTCTTGAATTTTACTCTTAAAGA13.8461538461538463No Hit
GTCTTAACCATAAACTATGCCGACTAGGGATCGGGTGGTGTTTTTTTAATGCCCCACTCGGCACCTTACGAGAAA13.8461538461538463No Hit
CTTACGTATATTAATGTATTCCTCAAAGCAGCTAACTCCTTCTGAGTAAAAGTTTGAAATTGGATTTTCAATTGC13.8461538461538463No Hit
GAATAAGAATTGAAGATGACATAGCCATTGGTGAAGATACTTACACTAATTTAACTGTTGAAGCAGTGAAAGAAA13.8461538461538463No Hit
AGCTGAAGGATAGATATTGTATTAGCAGCCATGAAAATAACATTAATTTCCAAGTACATCTCCATCTAAGCTTTT13.8461538461538463No Hit
CTATAGAGGTTATCGTGTATACGTATCTGTTGGTGTTTCTAAATCAAAAACTCTCTTTTAAAGCAGTCTTTCAAT13.8461538461538463No Hit
TTATATACGTTTAGGCAAAGGCGAAGAACGAATGGATGGTCGTAAAAGACCAGCTTTGCTTTGCGATTTATTCGA13.8461538461538463No Hit
GCTTTACAATGACCACATCACTAGCAATAGGAATTTTTCAGGTCCATTATAATCTTATGGGGCCACCATATCGTA13.8461538461538463No Hit
GACTCACAAAGCAACAAAAGGAGGAACTCGGCGGTGTCGAATCTGTCTCTTATACACAACTCCCAGCCCACGAGA13.8461538461538463No Hit
CTTCAACAAAATAGTAATTCTAAATCTTGGGGGAAGAGACCTTTCTAACCTGACCCGTATCCCCAGACCAATCAA13.8461538461538463No Hit
ATCAAGCATACAGTTCGTAGAAATGACAAAATTTTTACTGTTAGAAGGCAGGGGGAATTCGGATGGGAAGTTTAA13.8461538461538463No Hit
ATATATAGATAAATCAGAGCATTGAGTAGTAAAACTGAAGGCTCAAGAGTTCTGATACGCGATGAGAATTCGTGC13.8461538461538463No Hit
GGTATTTACATTGTACTCATTCCAATTACAAGACCCGAATGGGCCCTGTATCGTTATTTATTGTCACTACCTCCC13.8461538461538463No Hit
ACAGTGTTCAGTACAGTAGCATGCTGTACAAGCCTGTAGCCTAGGAGCCATAGGCTGTACCATATAGCCTGGGTG13.8461538461538463No Hit
ACCCACCTTACCTTTCTTCTGTTCTTACTCTACATGTCCTCCCTGGGAGACCTCATTTACTTTGATAATTTCAAC13.8461538461538463No Hit
ACTCTATACCACCACTACCACCACCGCCACTTGCCACACTCACCTTCACTTCTACTGATATGTCATACGCACACG13.8461538461538463No Hit
ATATAGTACATTTAATCCTTCTTGAGGTTTAAAGACGCACTGTTCACACAGTGTCTTGTGTCCTTGGGCAAGTTT13.8461538461538463No Hit
AGTATGTCCTCAATTAACAGAGTTGAACCTTTGTGTGGATACAGCATTATGGAAACATTCCTTTAGTAGAATCTG13.8461538461538463No Hit
ACATAATGGTTATAAGTAGACCGCAAATAAAAGTATGTAAAATTAGCTATGTTTCTACATTGTTTGTGCAATGAC13.8461538461538463No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.2)