FastQCFastQC Report
Thu 23 Mar 2017
HJNJTAFXX_n01_minidip01_66.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHJNJTAFXX_n01_minidip01_66.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11
Sequences flagged as poor quality0
Sequence length75
%GC40

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TATATATAGTGTTCAACTTCTCAAAAGTAATAAAGAAGCAAATGTGACCTAATGTTAAGATTTGATAAAACTGGG19.090909090909092No Hit
TAAAATTGCTTGTCTCTGCCTCTGGCTTTGTTCATCTAACCTCATATCTATCTTCTTCAACTTGGGAAACAGGAT19.090909090909092No Hit
TCAACACACTGTGTTGGGACACTTTGATATCTACATACAAAGGGATGGAATTGTGTTTGTCCTTCACATCATACA19.090909090909092No Hit
GATATAACAGGTATGACTTTCAAGTTATAGTATATTAAAGATCTTGGAATTGGGCGGTTTAGGCTTGTTCATTTC19.090909090909092No Hit
ACGAAAATTCTTCAAGCTATGGAGGCCCGGAACGACATTGTTGACAGTCTGATCATCAATAGTCACGCAACGGAA19.090909090909092No Hit
GTCCCAGCTACTGGAGAGGCTGAGGCAAGAAAACAGCTTGAACTTGGGAAAGGAAGGTTGCAGTGAGCTGAGATC19.090909090909092No Hit
CTATTTATTACCATTAATAATTGGAGCTACAGATACAGCATTTCCAAGAATTAATAACATTGCTTTTTGAGAATT19.090909090909092No Hit
ACCACCATGAGCCCTCTGGAGACATATAAGAAATCAACTCAATCCACATTGAGGATTTAGTCATCAATCGACTAA19.090909090909092No Hit
AAAGAAAGGAAGGAAGGAGGGAAGGCAAAGAGAAGGGAAGAAAGACAGGAAGGAAGAAAGAGAAAAAGAAGGAAG19.090909090909092No Hit
GCCTACAGGTACGAGAAAAATGTCATGCTAGGCCCGTTCAGACGCATTGAGGCTCGGGTGCTTCGCGTGGGCGCT19.090909090909092No Hit
CCTCAAAGCTATCCAAATATCCACTTTCAGATTCCACAAAAAGAGTGTTTCAAAACTGCTCTGTAAAAAGAAAGG19.090909090909092No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.2)