FastQCFastQC Report
Fri 10 Nov 2023
HJM7CAFX5_n02_liv_Hash_3.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHJM7CAFX5_n02_liv_Hash_3.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5395342
Sequences flagged as poor quality0
Sequence length151
%GC42

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCGTACCTCATTGTTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA57950810.740894645788906No Hit
TTCCTGCCATTACTAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA4378618.115537439517272No Hit
CCGTACCTCATTGTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA3215405.959585138439787No Hit
CCGTACCTCATTGTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA3202935.936472609150634No Hit
TTCCTGCCATTACTACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA2783405.158894468599025No Hit
TTCCTGCCATTACTATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA2365094.383577537809466No Hit
CCGTACCTCATTGTTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAT635191.177293302259616No Hit
TTCCTGCCATTACTAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAT513190.9511723260545856No Hit
CCGTACCTCATTGTTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATT408030.7562634583683481No Hit
CCGTACCTCATTGTTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAC395420.7328914459917463No Hit
CCGTACCTCATTGTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAT370100.6859620761760793No Hit
CCGTACCTCATTGTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAT362150.6712271437102597No Hit
TTCCTGCCATTACTAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAC344980.6394033964853387No Hit
TTCCTGCCATTACTAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATT331330.6141037954591202No Hit
TTCCTGCCATTACTACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAT324120.6007404164555278No Hit
TTCCTGCCATTACTAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAG309590.5738097788796336No Hit
CCGTACCTCATTGTTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAG291350.540002839486357No Hit
TTCCTGCCATTACTATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAT290420.5382791304054497No Hit
CCGTACCTCATTGTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAC251130.46545705536368226No Hit
CCGTACCTCATTGTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAC246270.4564492853279737No Hit
CCGTACCTCATTGTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATT245590.4551889389032243No Hit
CCGTACCTCATTGTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATT227370.42141906852244027No Hit
CCGTACCTCATTGTTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATA227300.4212893269787161No Hit
CCGTACCTCATTGTTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACA222310.41204060836180545No Hit
TTCCTGCCATTACTACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAC218850.4056276692005808No Hit
TTCCTGCCATTACTACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATT213010.39480351755273346No Hit
TTCCTGCCATTACTACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAG197710.36644572299587314No Hit
TTCCTGCCATTACTATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATT197030.36518537657112377No Hit
CCGTACCTCATTGTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAG193560.35875390290365283No Hit
TTCCTGCCATTACTAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACA192890.3575120909851498No Hit
TTCCTGCCATTACTATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAC191220.35441682844201533No Hit
TTCCTGCCATTACTATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAG184940.34277715851933016No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG184610.3421655198132018No Hit
CCGTACCTCATTGTTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTT183910.3408681043759599No Hit
CCGTACCTCATTGTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAG183590.3402750001760778No Hit
TTCCTGCCATTACTAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATA177990.329895676678142No Hit
CCGTACCTCATTGTTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACC173750.3220370460297049No Hit
TTCCTGCCATTACTAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGG164480.30485555873937187No Hit
CCGTACCTCATTGTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACA164040.30404004046453403No Hit
TTCCTGCCATTACTAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTT156700.2904357128797396No Hit
TTCCTGCCATTACTAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACC155300.28784088200525565No Hit
CCGTACCTCATTGTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATA154900.2870995017554031No Hit
CCGTACCTCATTGTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACA153950.2853387236620033No Hit
CCGTACCTCATTGTTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGG145080.26889861662152276No Hit
CCGTACCTCATTGTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATA140440.2602986057232331No Hit
TTCCTGCCATTACTACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACA137040.25399687359948636No Hit
CCGTACCTCATTGTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTT128580.23831668131510478No Hit
CCGTACCTCATTGTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA127590.23648176519671968No Hit
TTCCTGCCATTACTATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACA126050.23362745123478734No Hit
CCGTACCTCATTGTTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAA125080.2318296041288949No Hit
TTCCTGCCATTACTAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGA123580.2290494281919478No Hit
TTCCTGCCATTACTACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATA122870.22773347824845952No Hit
CCGTACCTCATTGTTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGA121510.22521278539896084No Hit
CCGTACCTCATTGTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACC115560.214184754182404No Hit
CCGTACCTCATTGTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACC115320.21373992603249248No Hit
TTCCTGCCATTACTATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATA115190.21349897745129037No Hit
TTCCTGCCATTACTACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTT112540.2085873332960172No Hit
TTCCTGCCATTACTATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTT111590.20682655520261736No Hit
CCGTACCTCATTGTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTT111410.2064929340901837No Hit
TTCCTGCCATTACTACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGG107410.19907913159165816No Hit
TTCCTGCCATTACTATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGG105540.19561317892359742No Hit
CCGTACCTCATTGTTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAA105350.19526102330491746No Hit
TTCCTGCCATTACTACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACC103090.19107222489325051No Hit
CCGTACCTCATTGTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAA102480.18994162001222537No Hit
TTCCTGCCATTACTAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAA100600.18645713283791834No Hit
CCGTACCTCATTGTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGG99360.1841588540633754No Hit
CCGTACCTCATTGTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGA93550.17339030593426702No Hit
CCGTACCTCATTGTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAA93150.17264892568441442No Hit
TTCCTGCCATTACTATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACC90200.16718124634175183No Hit
CCGTACCTCATTGTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGG88440.16391917324240057No Hit
TTCCTGCCATTACTATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGA86850.16097218674923666No Hit
TTCCTGCCATTACTACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGA86510.16034201353686198No Hit
CCGTACCTCATTGTTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTA85600.1586553734684474No Hit
TTCCTGCCATTACTACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAA82120.15220536529473017No Hit
CCGTACCTCATTGTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAA82110.15218683078848386No Hit
CCGTACCTCATTGTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGA80590.1493695858390441No Hit
TTCCTGCCATTACTAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAA80100.14846139503297476No Hit
TTCCTGCCATTACTATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAA78090.14473595927746566No Hit
CCGTACCTCATTGTTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATG77520.14367949242142575No Hit
TTCCTGCCATTACTAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATG77510.1436609579151794No Hit
CCGTACCTCATTGTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAA72220.13385620411087934No Hit
TTCCTGCCATTACTAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGG70960.13152085632384378No Hit
TTCCTGCCATTACTAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTA69800.12937085359927136No Hit
TTCCTGCCATTACTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA69640.12907430149933036No Hit
CCGTACCTCATTGTTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCC68280.12655360864983167No Hit
TTCCTGCCATTACTACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAA62740.11628549218937372No Hit
CCGTACCTCATTGTTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTTT62390.11563678447075273No Hit
CCGTACCTCATTGTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTA62380.11561824996450643No Hit
TTCCTGCCATTACTAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCC62250.11537730138330433No Hit
CCGTACCTCATTGTTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAA62200.11528462885207276No Hit
TTCCTGCCATTACTATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAA61370.11374626483362871No Hit
TTCCTGCCATTACTAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAA60290.1117445381590268No Hit
CCGTACCTCATTGTTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCA60040.11128117550286895No Hit
CCGTACCTCATTGTTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGG58740.10887168969084815No Hit
CCGTACCTCATTGTTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAAA57740.10701823906621676No Hit
TTCCTGCCATTACTATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGG56130.1040341835605602No Hit
CCGTACCTCATTGTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCC55690.10321866528572238No Hit
CCGTACCTCATTGTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTA54860.10168030126727834No Hit
TTCCTGCCATTACTAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGT54520.10105012805490365No Hit
TTCCTGCCATTACTAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCA54210.10047555836126792No Hit
CCGTACCTCATTGTTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGT54080.10023460978006585No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)