FastQCFastQC Report
Fri 10 Nov 2023
HJM7CAFX5_n02_liv_Hash_1.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHJM7CAFX5_n02_liv_Hash_1.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6268129
Sequences flagged as poor quality0
Sequence length151
%GC42

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCGTACCTCATTGTTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA67816210.819209368537246No Hit
TTCCTGCCATTACTAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA5172448.251968011507103No Hit
CCGTACCTCATTGTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA3810536.079214387578814No Hit
CCGTACCTCATTGTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA3787216.0420103032340275No Hit
TTCCTGCCATTACTACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA3303695.270615840867347No Hit
TTCCTGCCATTACTATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA2796714.4617939420200186No Hit
CCGTACCTCATTGTTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAT738891.178804711900473No Hit
TTCCTGCCATTACTAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAT599940.9571277170587906No Hit
CCGTACCTCATTGTTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATT475370.7583921773147936No Hit
CCGTACCTCATTGTTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAC456280.7279365182177967No Hit
CCGTACCTCATTGTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAT436600.6965395894053872No Hit
CCGTACCTCATTGTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAT419790.6697213793781206No Hit
TTCCTGCCATTACTAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATT388650.6200414828731189No Hit
TTCCTGCCATTACTAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAC386560.6167071545591994No Hit
TTCCTGCCATTACTACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAT382850.6107883229588925No Hit
TTCCTGCCATTACTAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAG353300.563645068568308No Hit
CCGTACCTCATTGTTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAG338650.5402728629228913No Hit
TTCCTGCCATTACTATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAT335070.534561429734455No Hit
CCGTACCTCATTGTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAC293360.4680184469719752No Hit
CCGTACCTCATTGTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAC291460.46498723941386655No Hit
CCGTACCTCATTGTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATT286810.45756875775849537No Hit
CCGTACCTCATTGTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATT271930.4338296164613077No Hit
CCGTACCTCATTGTTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACA265080.4229013155281265No Hit
CCGTACCTCATTGTTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATA264290.4216409713329129No Hit
TTCCTGCCATTACTACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAC254920.4066923319542402No Hit
TTCCTGCCATTACTACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATT250600.39980032319054065No Hit
TTCCTGCCATTACTATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATT229320.36585079853972374No Hit
TTCCTGCCATTACTACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAG228280.364191611244759No Hit
CCGTACCTCATTGTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAG225960.3604903472790684No Hit
TTCCTGCCATTACTAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACA223660.356820990761358No Hit
TTCCTGCCATTACTATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAC220460.3517157990845434No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG216910.34605222706807726No Hit
TTCCTGCCATTACTATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAG215210.34334009398976956No Hit
CCGTACCTCATTGTTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTT214170.3416809066948048No Hit
CCGTACCTCATTGTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAG209230.3337997670437223No Hit
TTCCTGCCATTACTAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATA203880.32526452470904793No Hit
CCGTACCTCATTGTTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACC199970.31902661862894016No Hit
TTCCTGCCATTACTAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGG195000.31109761780588757No Hit
CCGTACCTCATTGTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACA192250.30671034370862504No Hit
CCGTACCTCATTGTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACA183420.29262320542541487No Hit
TTCCTGCCATTACTAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTT181520.28959199786730616No Hit
CCGTACCTCATTGTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATA180470.2879168568483514No Hit
TTCCTGCCATTACTAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACC177630.2833859992351785No Hit
CCGTACCTCATTGTTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGG167660.2674801364171031No Hit
CCGTACCTCATTGTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATA163540.26090720213320434No Hit
TTCCTGCCATTACTACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACA157680.2515583198750377No Hit
CCGTACCTCATTGTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTT151920.24236897485677145No Hit
CCGTACCTCATTGTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA149490.23849221992719039No Hit
TTCCTGCCATTACTATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACA145030.23137685902763008No Hit
TTCCTGCCATTACTACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATA143420.22880830946523278No Hit
TTCCTGCCATTACTAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGA141290.2254101662553531No Hit
CCGTACCTCATTGTTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAA139770.22298520020886617No Hit
CCGTACCTCATTGTTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGA138310.2206559565063195No Hit
CCGTACCTCATTGTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACC136990.21855006493963347No Hit
TTCCTGCCATTACTATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATA133250.21258337216735648No Hit
CCGTACCTCATTGTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACC132810.2118814083117945No Hit
CCGTACCTCATTGTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTT132490.21137088914411303No Hit
TTCCTGCCATTACTACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTT129950.20731864325064148No Hit
TTCCTGCCATTACTATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTT129330.20632951236325864No Hit
TTCCTGCCATTACTATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGG124240.19820906685232548No Hit
CCGTACCTCATTGTTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAA123880.19763473278868382No Hit
TTCCTGCCATTACTACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGG123760.1974432881008033No Hit
TTCCTGCCATTACTACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACC120510.19225832780403848No Hit
CCGTACCTCATTGTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAA119060.1899450378254819No Hit
CCGTACCTCATTGTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGG118340.1887963696981986No Hit
TTCCTGCCATTACTAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAA114530.18271800085799128No Hit
CCGTACCTCATTGTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAA109590.17483686120690878No Hit
CCGTACCTCATTGTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGA108190.17260333984830242No Hit
TTCCTGCCATTACTATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACC107470.17145467172101914No Hit
CCGTACCTCATTGTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGG104770.16714716624370687No Hit
TTCCTGCCATTACTACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGA103040.16438717199342898No Hit
TTCCTGCCATTACTATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGA102140.1629513368343249No Hit
CCGTACCTCATTGTTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTA101130.16134001071133028No Hit
TTCCTGCCATTACTACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAA95610.15253355506882516No Hit
CCGTACCTCATTGTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAA95090.1517039614213428No Hit
TTCCTGCCATTACTAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAA94520.1507945991539102No Hit
CCGTACCTCATTGTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGA94180.15025217253824866No Hit
CCGTACCTCATTGTTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATG91090.1453224718253246No Hit
TTCCTGCCATTACTATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAA90550.14446097072986214No Hit
TTCCTGCCATTACTAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATG88870.14178074509953448No Hit
CCGTACCTCATTGTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAA84330.13453775440805382No Hit
TTCCTGCCATTACTAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTA81670.13029406382670172No Hit
TTCCTGCCATTACTAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGG80670.12869869142769716No Hit
TTCCTGCCATTACTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA79900.12747025468046366No Hit
CCGTACCTCATTGTTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCC79680.12711927275268264No Hit
TTCCTGCCATTACTACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAA74020.11808946497431691No Hit
CCGTACCTCATTGTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTA72110.11504230369221821No Hit
TTCCTGCCATTACTAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCC71750.11446796962857655No Hit
TTCCTGCCATTACTATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAA71530.11411698770079556No Hit
CCGTACCTCATTGTTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTTT71460.11400531163286524No Hit
CCGTACCTCATTGTTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAA69540.1109421966267765No Hit
CCGTACCTCATTGTTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGG68220.1088363050600905No Hit
CCGTACCTCATTGTTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCA67470.10763977576083708No Hit
TTCCTGCCATTACTAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAA66950.10681018211335472No Hit
CCGTACCTCATTGTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCC65400.10433735489489765No Hit
CCGTACCTCATTGTTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAAA65280.1041459102070171No Hit
TTCCTGCCATTACTATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGG64580.10302914952771394No Hit
CCGTACCTCATTGTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTA63770.10173689788452024No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)