HJKYNBCXX_l02n01_vs16_160909.35100000068a06.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HJKYNBCXX_l02n01_vs16_160909.35100000068a06.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	7623593
Sequences flagged as poor quality	0
Sequence length	51
%GC	37

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGATCAGATCTCGTATGCC	155691	2.0422260212474614	TruSeq Adapter, Index 9 (100% over 51bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCACACG	16430	43.681747	11
ACACGTC	16480	43.50826	13
GATCGGA	16710	43.117413	1
ACGTCTG	16620	43.08762	15
CACACGT	16680	43.027046	12
CACGTCT	16670	42.971878	14
AGTCACG	16585	42.775234	28
CGATCAG	16660	42.746418	33
GTCACGA	16675	42.558414	29
AGCACAC	16895	42.53276	10
CACGATC	16745	42.461403	31
CGTCTGA	16900	42.34712	16
CGTATGC	16840	42.221035	44
GATCTCG	16800	42.176727	39
GAGCACA	17070	42.123085	9
GTATGCC	16930	42.009327	45
CAGTCAC	16980	41.82102	27
AGAGCAC	17215	41.80749	8
GAACTCC	17065	41.785492	21
TCCAGTC	17030	41.699875	25