HJKYNBCXX_l01n01_vs10_160909.35100000068971.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HJKYNBCXX_l01n01_vs10_160909.35100000068971.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	9245561
Sequences flagged as poor quality	0
Sequence length	51
%GC	38

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCCGTCCCGATCTCGTATG	187344	2.0263129516964953	TruSeq Adapter, Index 16 (97% over 40bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCACACG	21360	43.396152	11
CGTCCCG	20820	43.31609	35
GATCGGA	21760	43.148216	1
GTCCCGA	20965	43.014175	36
ACACGTC	21700	42.79916	13
TCACCCG	21265	42.73974	30
CCCGTCC	21210	42.710342	33
ACGTCTG	21730	42.657238	15
AGCACAC	21785	42.642494	10
CACACGT	21775	42.64141	12
ACCCGTC	21355	42.475315	32
CACGTCT	21850	42.453857	14
CCCGATC	21170	42.405655	38
CACCCGT	21495	42.313824	31
CCGTCCC	21445	42.242306	34
GAGCACA	22115	42.168957	9
CGTCTGA	22085	42.00235	16
GTCACCC	21740	41.836964	29
TCCCGAT	21590	41.821083	37
AGAGCAC	22340	41.76552	8