Sample Filename File type Encoding Total Sequences Sequences flagged as poor quality Sequence length %GC total_deduplicated_percentage avg_sequence_length basic_statistics per_base_sequence_quality per_tile_sequence_quality per_sequence_quality_scores per_base_sequence_content per_sequence_gc_content per_base_n_content sequence_length_distribution sequence_duplication_levels overrepresented_sequences adapter_content HJKC5AFX3_n01_T0_Rep1 HJKC5AFX3_n01_T0_Rep1.fastq.gz Conventional base calls Sanger / Illumina 1.9 53.0 0.0 151.0 40.0 98.11320754716981 151.0 pass pass fail warn fail fail pass pass pass fail fail HJKC5AFX3_n01_T0_Rep2 HJKC5AFX3_n01_T0_Rep2.fastq.gz Conventional base calls Sanger / Illumina 1.9 59.0 0.0 151.0 42.0 100.0 151.0 pass pass fail warn fail fail pass pass pass fail warn HJKC5AFX3_n01_T12_Rep1 HJKC5AFX3_n01_T12_Rep1.fastq.gz Conventional base calls Sanger / Illumina 1.9 58.0 0.0 151.0 52.0 93.10344827586206 151.0 pass pass fail warn fail fail pass pass pass fail pass HJKC5AFX3_n01_T12_Rep2 HJKC5AFX3_n01_T12_Rep2.fastq.gz Conventional base calls Sanger / Illumina 1.9 47.0 0.0 151.0 43.0 95.74468085106383 151.0 pass pass fail warn fail fail pass pass pass fail warn HJKC5AFX3_n01_T18_Rep1 HJKC5AFX3_n01_T18_Rep1.fastq.gz Conventional base calls Sanger / Illumina 1.9 62.0 0.0 151.0 41.0 98.38709677419355 151.0 pass pass fail warn fail fail pass pass pass fail pass HJKC5AFX3_n01_T18_Rep2 HJKC5AFX3_n01_T18_Rep2.fastq.gz Conventional base calls Sanger / Illumina 1.9 43.0 0.0 151.0 40.0 97.67441860465115 151.0 pass pass fail warn fail fail pass pass pass fail pass HJKC5AFX3_n01_T6_Rep1 HJKC5AFX3_n01_T6_Rep1.fastq.gz Conventional base calls Sanger / Illumina 1.9 61.0 0.0 151.0 40.0 100.0 151.0 pass pass fail warn fail fail pass pass pass fail pass HJKC5AFX3_n01_T6_Rep2 HJKC5AFX3_n01_T6_Rep2.fastq.gz Conventional base calls Sanger / Illumina 1.9 26.0 0.0 151.0 45.0 96.15384615384616 151.0 pass pass fail warn fail fail pass pass pass fail warn HJKC5AFX3_n01_undetermined HJKC5AFX3_n01_undetermined.fastq.gz Conventional base calls Sanger / Illumina 1.9 312399.0 0.0 151.0 39.0 91.48166223420486 151.0 pass fail fail warn fail fail pass pass pass warn pass