Sample sequence_length_distribution kmer_content per_sequence_quality_scores File type %GC total_deduplicated_percentage sequence_duplication_levels Encoding Sequences flagged as poor quality per_sequence_gc_content Filename overrepresented_sequences per_base_sequence_quality avg_sequence_length Sequence length basic_statistics per_base_n_content adapter_content per_tile_sequence_quality per_base_sequence_content Total Sequences HJJJKBGX5_n01_bzip1_180_pchx_r1 pass fail pass Conventional base calls 57.0 49.194031888036854 fail Sanger / Illumina 1.9 0.0 fail HJJJKBGX5_n01_bzip1_180_pchx_r1.fastq.gz pass pass 75.0 75.0 pass pass pass pass warn 20116276.0 HJJJKBGX5_n01_bzip1_180_pchx_r2 pass fail pass Conventional base calls 56.0 44.33808228199737 fail Sanger / Illumina 1.9 0.0 fail HJJJKBGX5_n01_bzip1_180_pchx_r2.fastq.gz fail pass 75.0 75.0 pass pass pass pass warn 17825382.0 HJJJKBGX5_n01_bzip1_5_pchx_r1 pass fail pass Conventional base calls 58.0 47.11053143813123 fail Sanger / Illumina 1.9 0.0 fail HJJJKBGX5_n01_bzip1_5_pchx_r1.fastq.gz pass pass 75.0 75.0 pass pass pass pass fail 23344781.0 HJJJKBGX5_n01_bzip1_5_pchx_r2 pass fail pass Conventional base calls 57.0 53.97311964601103 warn Sanger / Illumina 1.9 0.0 fail HJJJKBGX5_n01_bzip1_5_pchx_r2.fastq.gz warn pass 75.0 75.0 pass pass pass pass warn 22132615.0 HJJJKBGX5_n01_damid_bzip1_r1 pass fail pass Conventional base calls 57.0 52.14186324568338 warn Sanger / Illumina 1.9 0.0 warn HJJJKBGX5_n01_damid_bzip1_r1.fastq.gz fail pass 75.0 75.0 pass pass fail pass fail 25919977.0 HJJJKBGX5_n01_damid_bzip1_r2 pass fail pass Conventional base calls 61.0 57.439745222366 warn Sanger / Illumina 1.9 0.0 fail HJJJKBGX5_n01_damid_bzip1_r2.fastq.gz fail pass 75.0 75.0 pass pass warn pass fail 17166119.0 HJJJKBGX5_n01_damid_gr_bzip1_mdex pass fail pass Conventional base calls 52.0 51.09234990597364 warn Sanger / Illumina 1.9 0.0 warn HJJJKBGX5_n01_damid_gr_bzip1_mdex.fastq.gz warn pass 75.0 75.0 pass pass pass pass fail 1830309.0 HJJJKBGX5_n01_damid_gr_bzip1_pdex pass fail pass Conventional base calls 48.0 59.52371573722601 warn Sanger / Illumina 1.9 0.0 pass HJJJKBGX5_n01_damid_gr_bzip1_pdex.fastq.gz warn pass 75.0 75.0 pass pass pass pass fail 1322063.0 HJJJKBGX5_n01_damid_gr_mdex pass fail pass Conventional base calls 51.0 51.518494889416836 warn Sanger / Illumina 1.9 0.0 warn HJJJKBGX5_n01_damid_gr_mdex.fastq.gz warn pass 75.0 75.0 pass pass pass pass fail 1910261.0 HJJJKBGX5_n01_damid_gr_pdex pass fail pass Conventional base calls 49.0 67.35842320294886 warn Sanger / Illumina 1.9 0.0 pass HJJJKBGX5_n01_damid_gr_pdex.fastq.gz warn pass 75.0 75.0 pass pass pass pass fail 723215.0 HJJJKBGX5_n01_damid_nlp7_r1 pass fail pass Conventional base calls 60.0 52.39271657709826 warn Sanger / Illumina 1.9 0.0 fail HJJJKBGX5_n01_damid_nlp7_r1.fastq.gz fail pass 75.0 75.0 pass pass warn pass fail 20702986.0 HJJJKBGX5_n01_damid_nlp7_r2 pass fail pass Conventional base calls 59.0 47.984058202787615 fail Sanger / Illumina 1.9 0.0 warn HJJJKBGX5_n01_damid_nlp7_r2.fastq.gz warn pass 75.0 75.0 pass pass fail pass fail 26947381.0 HJJJKBGX5_n01_ev_180_pchx_r1 pass fail pass Conventional base calls 56.0 45.28380540364244 fail Sanger / Illumina 1.9 0.0 fail HJJJKBGX5_n01_ev_180_pchx_r1.fastq.gz pass pass 75.0 75.0 pass pass pass pass fail 23506930.0 HJJJKBGX5_n01_ev_180_pchx_r2 pass fail pass Conventional base calls 48.0 13.968821813029766 fail Sanger / Illumina 1.9 0.0 warn HJJJKBGX5_n01_ev_180_pchx_r2.fastq.gz warn pass 75.0 75.0 pass pass pass pass warn 36018134.0 HJJJKBGX5_n01_ev_5_pchx_r1 pass fail pass Conventional base calls 57.0 41.31795300250205 fail Sanger / Illumina 1.9 0.0 fail HJJJKBGX5_n01_ev_5_pchx_r1.fastq.gz pass pass 75.0 75.0 pass pass pass pass fail 22608869.0 HJJJKBGX5_n01_ev_5_pchx_r2 pass fail pass Conventional base calls 55.0 40.47842644971635 fail Sanger / Illumina 1.9 0.0 fail HJJJKBGX5_n01_ev_5_pchx_r2.fastq.gz warn pass 75.0 75.0 pass pass warn pass fail 13717937.0 HJJJKBGX5_n01_input_bzip1_180_pchx_r1 pass fail pass Conventional base calls 47.0 17.451189861486814 fail Sanger / Illumina 1.9 0.0 warn HJJJKBGX5_n01_input_bzip1_180_pchx_r1.fastq.gz warn pass 75.0 75.0 pass pass pass pass warn 27187083.0 HJJJKBGX5_n01_input_bzip1_5_pchx_r1 pass fail pass Conventional base calls 48.0 12.865367856018109 fail Sanger / Illumina 1.9 0.0 warn HJJJKBGX5_n01_input_bzip1_5_pchx_r1.fastq.gz warn pass 75.0 75.0 pass pass pass pass warn 27456500.0 HJJJKBGX5_n01_input_nlp7_180_pchx_r1 pass fail pass Conventional base calls 47.0 16.68318951665683 fail Sanger / Illumina 1.9 0.0 warn HJJJKBGX5_n01_input_nlp7_180_pchx_r1.fastq.gz warn pass 75.0 75.0 pass pass pass pass warn 26769231.0 HJJJKBGX5_n01_input_nlp7_5_pchx_r1 pass fail pass Conventional base calls 46.0 20.29880680580508 fail Sanger / Illumina 1.9 0.0 warn HJJJKBGX5_n01_input_nlp7_5_pchx_r1.fastq.gz pass pass 75.0 75.0 pass pass pass pass warn 20782687.0 HJJJKBGX5_n01_nlp7_180_pchx_r1 pass fail pass Conventional base calls 60.0 51.597915370886426 warn Sanger / Illumina 1.9 0.0 fail HJJJKBGX5_n01_nlp7_180_pchx_r1.fastq.gz pass pass 75.0 75.0 pass pass pass pass fail 25674235.0 HJJJKBGX5_n01_nlp7_180_pchx_r2 pass fail pass Conventional base calls 61.0 48.291691421630475 fail Sanger / Illumina 1.9 0.0 fail HJJJKBGX5_n01_nlp7_180_pchx_r2.fastq.gz fail pass 75.0 75.0 pass pass pass pass warn 16459724.0 HJJJKBGX5_n01_nlp7_5_pchx_r1 pass fail pass Conventional base calls 59.0 48.89020166454173 fail Sanger / Illumina 1.9 0.0 fail HJJJKBGX5_n01_nlp7_5_pchx_r1.fastq.gz pass pass 75.0 75.0 pass pass pass pass fail 25269159.0 HJJJKBGX5_n01_nlp7_5_pchx_r2 pass fail pass Conventional base calls 58.0 47.0907450391509 fail Sanger / Illumina 1.9 0.0 fail HJJJKBGX5_n01_nlp7_5_pchx_r2.fastq.gz warn pass 75.0 75.0 pass pass pass pass warn 20969265.0