Sample basic_statistics avg_sequence_length %GC Filename total_deduplicated_percentage per_sequence_gc_content Total Sequences Sequence length per_base_sequence_content per_sequence_quality_scores per_base_n_content kmer_content Encoding sequence_length_distribution overrepresented_sequences File type adapter_content per_tile_sequence_quality Sequences flagged as poor quality per_base_sequence_quality sequence_duplication_levels HJJH3BGX5_n01_ir108_3bs_15_1 pass 75.0 53.0 HJJH3BGX5_n01_ir108_3bs_15_1.fastq.gz 38.76985963715383 fail 20208982.0 75.0 fail pass pass fail Sanger / Illumina 1.9 pass pass Conventional base calls pass pass 0.0 pass fail HJJH3BGX5_n01_ir108_3bs_15_2 pass 75.0 53.0 HJJH3BGX5_n01_ir108_3bs_15_2.fastq.gz 39.405103644500606 warn 17950147.0 75.0 fail pass pass fail Sanger / Illumina 1.9 pass pass Conventional base calls pass pass 0.0 pass fail HJJH3BGX5_n01_ir108_3bw_11_1 pass 75.0 53.0 HJJH3BGX5_n01_ir108_3bw_11_1.fastq.gz 34.72156724850331 warn 11123475.0 75.0 fail pass pass fail Sanger / Illumina 1.9 pass warn Conventional base calls pass pass 0.0 pass fail HJJH3BGX5_n01_ir108_3bw_11_2 pass 75.0 53.0 HJJH3BGX5_n01_ir108_3bw_11_2.fastq.gz 32.25738791765243 warn 7421857.0 75.0 fail pass pass fail Sanger / Illumina 1.9 pass warn Conventional base calls pass pass 0.0 pass fail HJJH3BGX5_n01_ir108_3bw_1_1 pass 75.0 53.0 HJJH3BGX5_n01_ir108_3bw_1_1.fastq.gz 37.85770304343569 warn 12709309.0 75.0 fail pass pass fail Sanger / Illumina 1.9 pass pass Conventional base calls pass pass 0.0 pass fail HJJH3BGX5_n01_ir108_3bw_1_2 pass 75.0 53.0 HJJH3BGX5_n01_ir108_3bw_1_2.fastq.gz 34.37750784545878 warn 11721325.0 75.0 fail pass pass fail Sanger / Illumina 1.9 pass pass Conventional base calls pass pass 0.0 pass fail HJJH3BGX5_n01_ir108_3bw_9_1 pass 75.0 53.0 HJJH3BGX5_n01_ir108_3bw_9_1.fastq.gz 29.489158672998663 warn 23014902.0 75.0 fail pass pass fail Sanger / Illumina 1.9 pass warn Conventional base calls pass pass 0.0 pass fail HJJH3BGX5_n01_ir108_3bw_9_2 pass 75.0 53.0 HJJH3BGX5_n01_ir108_3bw_9_2.fastq.gz 39.166813668491805 pass 7202505.0 75.0 fail pass pass fail Sanger / Illumina 1.9 pass pass Conventional base calls pass pass 0.0 pass fail HJJH3BGX5_n01_ir108_4bs_15_1 pass 75.0 52.0 HJJH3BGX5_n01_ir108_4bs_15_1.fastq.gz 39.264190133164455 fail 24710506.0 75.0 fail pass pass fail Sanger / Illumina 1.9 pass pass Conventional base calls pass pass 0.0 pass fail HJJH3BGX5_n01_ir108_4bs_15_2 pass 75.0 52.0 HJJH3BGX5_n01_ir108_4bs_15_2.fastq.gz 39.40987506195037 pass 14938337.0 75.0 fail pass pass fail Sanger / Illumina 1.9 pass pass Conventional base calls pass pass 0.0 pass fail HJJH3BGX5_n01_ir108_4bw_11_1 pass 75.0 53.0 HJJH3BGX5_n01_ir108_4bw_11_1.fastq.gz 34.31105096357717 warn 12111009.0 75.0 fail pass pass fail Sanger / Illumina 1.9 pass warn Conventional base calls pass pass 0.0 pass fail HJJH3BGX5_n01_ir108_4bw_11_2 pass 75.0 54.0 HJJH3BGX5_n01_ir108_4bw_11_2.fastq.gz 31.429493342767557 warn 10133110.0 75.0 fail pass pass fail Sanger / Illumina 1.9 pass warn Conventional base calls pass pass 0.0 pass fail HJJH3BGX5_n01_ir108_4bw_1_1 pass 75.0 52.0 HJJH3BGX5_n01_ir108_4bw_1_1.fastq.gz 39.83437720308448 warn 19947352.0 75.0 fail pass pass fail Sanger / Illumina 1.9 pass pass Conventional base calls pass pass 0.0 pass fail HJJH3BGX5_n01_ir108_4bw_1_2 pass 75.0 52.0 HJJH3BGX5_n01_ir108_4bw_1_2.fastq.gz 28.44443480106449 warn 23499910.0 75.0 fail pass pass fail Sanger / Illumina 1.9 pass warn Conventional base calls pass pass 0.0 pass fail HJJH3BGX5_n01_ir108_4bw_6_1 pass 75.0 53.0 HJJH3BGX5_n01_ir108_4bw_6_1.fastq.gz 98.08342728297632 warn 887.0 75.0 fail pass pass pass Sanger / Illumina 1.9 pass warn Conventional base calls pass fail 0.0 pass pass HJJH3BGX5_n01_ir108_4bw_6_2 pass 75.0 53.0 HJJH3BGX5_n01_ir108_4bw_6_2.fastq.gz 28.333453811934252 pass 18245611.0 75.0 fail pass pass fail Sanger / Illumina 1.9 pass pass Conventional base calls pass pass 0.0 pass fail HJJH3BGX5_n01_ir108_4bw_9_1 pass 75.0 53.0 HJJH3BGX5_n01_ir108_4bw_9_1.fastq.gz 33.053868073974684 pass 20786689.0 75.0 fail pass pass fail Sanger / Illumina 1.9 pass pass Conventional base calls pass pass 0.0 pass fail HJJH3BGX5_n01_ir108_4bw_9_2 pass 75.0 53.0 HJJH3BGX5_n01_ir108_4bw_9_2.fastq.gz 34.092790832930326 warn 8620958.0 75.0 fail pass pass fail Sanger / Illumina 1.9 pass pass Conventional base calls pass pass 0.0 pass fail HJJH3BGX5_n01_ir64_3bs_15_1 pass 75.0 52.0 HJJH3BGX5_n01_ir64_3bs_15_1.fastq.gz 37.809047977094 pass 15499057.0 75.0 fail pass pass fail Sanger / Illumina 1.9 pass pass Conventional base calls pass pass 0.0 pass fail HJJH3BGX5_n01_ir64_3bw_11_1 pass 75.0 52.0 HJJH3BGX5_n01_ir64_3bw_11_1.fastq.gz 36.18475391357493 warn 9888829.0 75.0 fail pass pass fail Sanger / Illumina 1.9 pass pass Conventional base calls pass pass 0.0 pass fail HJJH3BGX5_n01_ir64_3bw_11_2 pass 75.0 52.0 HJJH3BGX5_n01_ir64_3bw_11_2.fastq.gz 24.43216170257498 fail 24404859.0 75.0 fail pass pass fail Sanger / Illumina 1.9 pass warn Conventional base calls pass pass 0.0 pass fail HJJH3BGX5_n01_ir64_3bw_1_1 pass 75.0 52.0 HJJH3BGX5_n01_ir64_3bw_1_1.fastq.gz 35.26455911577014 warn 16314446.0 75.0 fail pass pass fail Sanger / Illumina 1.9 pass pass Conventional base calls pass pass 0.0 pass fail HJJH3BGX5_n01_ir64_3bw_1_2 pass 75.0 53.0 HJJH3BGX5_n01_ir64_3bw_1_2.fastq.gz 32.592933443368516 warn 20253186.0 75.0 fail pass pass fail Sanger / Illumina 1.9 pass pass Conventional base calls pass pass 0.0 pass fail HJJH3BGX5_n01_ir64_3bw_6_1 pass 75.0 53.0 HJJH3BGX5_n01_ir64_3bw_6_1.fastq.gz 30.28784779545788 warn 18188240.0 75.0 fail pass pass fail Sanger / Illumina 1.9 pass warn Conventional base calls pass pass 0.0 pass fail HJJH3BGX5_n01_ir64_3bw_6_2 pass 75.0 52.0 HJJH3BGX5_n01_ir64_3bw_6_2.fastq.gz 38.35005464877079 warn 15186947.0 75.0 fail pass pass fail Sanger / Illumina 1.9 pass pass Conventional base calls pass pass 0.0 pass fail HJJH3BGX5_n01_ir64_3bw_9_1 pass 75.0 52.0 HJJH3BGX5_n01_ir64_3bw_9_1.fastq.gz 40.264410642160854 warn 8917252.0 75.0 fail pass pass fail Sanger / Illumina 1.9 pass pass Conventional base calls pass pass 0.0 pass fail HJJH3BGX5_n01_ir64_3bw_9_2 pass 75.0 50.0 HJJH3BGX5_n01_ir64_3bw_9_2.fastq.gz 41.54028028641232 fail 6416405.0 75.0 fail pass pass fail Sanger / Illumina 1.9 pass pass Conventional base calls pass pass 0.0 pass fail HJJH3BGX5_n01_ir64_4bs_15_1 pass 75.0 52.0 HJJH3BGX5_n01_ir64_4bs_15_1.fastq.gz 43.71352478834978 pass 5777123.0 75.0 fail pass pass fail Sanger / Illumina 1.9 pass warn Conventional base calls pass pass 0.0 pass fail HJJH3BGX5_n01_ir64_4bw_11_1 pass 75.0 53.0 HJJH3BGX5_n01_ir64_4bw_11_1.fastq.gz 29.627319768937365 warn 14062294.0 75.0 fail pass pass fail Sanger / Illumina 1.9 pass warn Conventional base calls pass pass 0.0 pass fail HJJH3BGX5_n01_ir64_4bw_11_2 pass 75.0 53.0 HJJH3BGX5_n01_ir64_4bw_11_2.fastq.gz 25.914272790909838 warn 14306999.0 75.0 fail pass pass fail Sanger / Illumina 1.9 pass warn Conventional base calls pass pass 0.0 pass fail HJJH3BGX5_n01_ir64_4bw_1_1 pass 75.0 54.0 HJJH3BGX5_n01_ir64_4bw_1_1.fastq.gz 35.96742422343656 pass 9098090.0 75.0 fail pass pass fail Sanger / Illumina 1.9 pass pass Conventional base calls pass pass 0.0 pass fail HJJH3BGX5_n01_ir64_4bw_1_2 pass 75.0 53.0 HJJH3BGX5_n01_ir64_4bw_1_2.fastq.gz 31.130290461528414 warn 11521623.0 75.0 fail pass pass fail Sanger / Illumina 1.9 pass warn Conventional base calls pass pass 0.0 pass fail HJJH3BGX5_n01_ir64_4bw_6_1 pass 75.0 54.0 HJJH3BGX5_n01_ir64_4bw_6_1.fastq.gz 38.17484890569448 pass 8519452.0 75.0 fail pass pass fail Sanger / Illumina 1.9 pass pass Conventional base calls pass pass 0.0 pass fail HJJH3BGX5_n01_ir64_4bw_6_2 pass 75.0 53.0 HJJH3BGX5_n01_ir64_4bw_6_2.fastq.gz 35.089125832768175 warn 10328532.0 75.0 fail pass pass fail Sanger / Illumina 1.9 pass pass Conventional base calls pass pass 0.0 pass fail HJJH3BGX5_n01_ir64_4bw_9_1 pass 75.0 53.0 HJJH3BGX5_n01_ir64_4bw_9_1.fastq.gz 36.225396333863976 warn 5585843.0 75.0 fail pass pass fail Sanger / Illumina 1.9 pass warn Conventional base calls pass pass 0.0 pass fail HJJH3BGX5_n01_ir64_4bw_9_2 pass 75.0 53.0 HJJH3BGX5_n01_ir64_4bw_9_2.fastq.gz 29.791543441314904 warn 7911131.0 75.0 fail pass pass fail Sanger / Illumina 1.9 pass warn Conventional base calls pass pass 0.0 pass fail