HJHJYBCXY_l02n01_ah119c3.35100000087144.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HJHJYBCXY_l02n01_ah119c3.35100000087144.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1926576
Sequences flagged as poor quality	0
Sequence length	51
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCCGTCCCGATCTCGTATG	36187	1.878306383968242	TruSeq Adapter, Index 16 (97% over 40bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCACACG	4170	43.649998	11
GTCCCGA	4065	43.559803	36
ACACGTC	4180	43.437916	13
TCGGAAG	4225	43.40467	3
CGTCCCG	4085	43.23638	35
GATCGGA	4270	43.235413	1
GAGCACA	4200	43.23107	9
CACGTCT	4200	43.1775	14
CACACGT	4210	43.128384	12
ACCCGTC	4140	43.042408	32
ACGTCTG	4205	42.96564	15
CCCGTCC	4155	42.887024	33
CACCCGT	4170	42.78671	31
ATCGGAA	4330	42.72033	2
CAGTCAC	4180	42.684345	27
AGCACAC	4265	42.677723	10
TCGTATG	4145	42.664803	45
TCCCGAT	4130	42.656326	37
AGTCACC	4205	42.644604	28
CGATCTC	4135	42.3871	40