Sample Filename File type Encoding Total Sequences Sequences flagged as poor quality Sequence length %GC total_deduplicated_percentage avg_sequence_length basic_statistics per_base_sequence_quality per_tile_sequence_quality per_sequence_quality_scores per_base_sequence_content per_sequence_gc_content per_base_n_content sequence_length_distribution sequence_duplication_levels overrepresented_sequences adapter_content HJF5GDRXY_n01_JK11_hic HJF5GDRXY_n01_JK11_hic.fastq.gz Conventional base calls Sanger / Illumina 1.9 308500358.0 0.0 101.0 40.0 39.92886415680821 101.0 pass pass warn pass warn fail pass pass fail pass pass HJF5GDRXY_n01_JK12_hic HJF5GDRXY_n01_JK12_hic.fastq.gz Conventional base calls Sanger / Illumina 1.9 251205831.0 0.0 101.0 36.0 45.12420994671839 101.0 pass pass warn pass warn pass pass pass fail pass pass HJF5GDRXY_n01_JK13_hic HJF5GDRXY_n01_JK13_hic.fastq.gz Conventional base calls Sanger / Illumina 1.9 83399135.0 0.0 101.0 42.0 66.09878023907157 101.0 pass pass warn pass fail pass pass pass warn pass pass HJF5GDRXY_n01_JK14_hic HJF5GDRXY_n01_JK14_hic.fastq.gz Conventional base calls Sanger / Illumina 1.9 99953399.0 0.0 101.0 35.0 62.219082802612405 101.0 pass pass warn pass warn pass pass pass warn pass pass HJF5GDRXY_n01_JK17_hic HJF5GDRXY_n01_JK17_hic.fastq.gz Conventional base calls Sanger / Illumina 1.9 100782647.0 0.0 101.0 35.0 59.48690725407735 101.0 pass pass warn pass fail pass pass pass warn pass pass HJF5GDRXY_n01_JK18_hic HJF5GDRXY_n01_JK18_hic.fastq.gz Conventional base calls Sanger / Illumina 1.9 70605180.0 0.0 101.0 35.0 62.99236540407491 101.0 pass pass warn pass fail pass pass pass warn pass pass HJF5GDRXY_n01_JK19_hic HJF5GDRXY_n01_JK19_hic.fastq.gz Conventional base calls Sanger / Illumina 1.9 116602571.0 0.0 101.0 35.0 59.32503615679337 101.0 pass pass warn pass fail pass pass pass warn pass pass HJF5GDRXY_n01_undetermined HJF5GDRXY_n01_undetermined.fastq.gz Conventional base calls Sanger / Illumina 1.9 39112843.0 0.0 101.0 40.0 43.58833618984522 101.0 pass pass warn pass warn fail pass pass fail pass pass HJF5GDRXY_n02_JK11_hic HJF5GDRXY_n02_JK11_hic.fastq.gz Conventional base calls Sanger / Illumina 1.9 308500358.0 0.0 101.0 40.0 41.39651685034627 101.0 pass pass warn pass warn fail pass pass fail pass pass HJF5GDRXY_n02_JK12_hic HJF5GDRXY_n02_JK12_hic.fastq.gz Conventional base calls Sanger / Illumina 1.9 251205831.0 0.0 101.0 36.0 46.751767182727164 101.0 pass pass warn pass warn pass pass pass fail pass pass HJF5GDRXY_n02_JK13_hic HJF5GDRXY_n02_JK13_hic.fastq.gz Conventional base calls Sanger / Illumina 1.9 83399135.0 0.0 101.0 42.0 66.8817350742254 101.0 pass pass warn pass warn pass pass pass warn pass pass HJF5GDRXY_n02_JK14_hic HJF5GDRXY_n02_JK14_hic.fastq.gz Conventional base calls Sanger / Illumina 1.9 99953399.0 0.0 101.0 35.0 63.08127487642962 101.0 pass pass warn pass warn pass pass pass warn pass pass HJF5GDRXY_n02_JK17_hic HJF5GDRXY_n02_JK17_hic.fastq.gz Conventional base calls Sanger / Illumina 1.9 100782647.0 0.0 101.0 35.0 60.44046650614398 101.0 pass pass warn pass fail pass pass pass warn pass pass HJF5GDRXY_n02_JK18_hic HJF5GDRXY_n02_JK18_hic.fastq.gz Conventional base calls Sanger / Illumina 1.9 70605180.0 0.0 101.0 35.0 63.59657337291582 101.0 pass pass warn pass fail pass pass pass warn pass pass HJF5GDRXY_n02_JK19_hic HJF5GDRXY_n02_JK19_hic.fastq.gz Conventional base calls Sanger / Illumina 1.9 116602571.0 0.0 101.0 35.0 60.078667070102235 101.0 pass pass warn pass warn pass pass pass warn pass pass HJF5GDRXY_n02_undetermined HJF5GDRXY_n02_undetermined.fastq.gz Conventional base calls Sanger / Illumina 1.9 39112843.0 0.0 101.0 40.0 42.767543089118114 101.0 pass pass warn pass warn fail pass pass fail warn pass