HJ777BGXC_n01_Mock_30min_3.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HJ777BGXC_n01_Mock_30min_3.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	10107100
Sequences flagged as poor quality	0
Sequence length	101
%GC	49

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTGTTTGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	18798	0.18598806779392704	No Hit
CTTTGTGTTTGACCCCAGGTCAGGCGGGATTACCCGCTGAGTTTAAGCAT	13982	0.1383383957811835	No Hit
GTGTTTGACCCCAGGTCAGGCGGGATTACCCGCTGAGTTTAAGCATATCA	13916	0.1376853894786833	No Hit
TGTTTGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	12426	0.12294327749799647	No Hit
CTTTGTGTTTGAGCCCGGTATTGTTATTTATTGTCACTACCTCCCCGTGT	12240	0.12110298700913219	No Hit
CTTTGTGTTTGACGGGCGGTGTGTACAAAGGGCAGGGACGTAGTCAACGC	10742	0.10628172274935442	No Hit
ACTTTGTGTTTGACCCCAGGTCAGGCGGGATTACCCGCTGAGTTTAAGCA	10654	0.10541104767935411	No Hit
GTGTTTGATGCCCGCGTCGCGATAGTAATTCAACCTAGTACGAGAGGAAC	10500	0.10388736630685359	No Hit
GTGTTTGACGGGCGGTGTGTACAAAGGGCAGGGACGTAGTCAACGCGAGC	10313	0.10203718178310296	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
ACTTTGT	71875	65.53259	1
TTTGTGT	147990	45.664547	2
CTTTGTG	148785	45.3659	1
TGTGTTT	167440	42.009712	4
TTGTGTT	174855	40.11161	3
GGTAACT	18910	36.103687	1
CCTTGTG	3905	33.82284	1
GTAACTT	20175	33.691807	2
CTTGTGT	7215	33.181225	2
GTTTGAT	89275	30.864435	3
TAACTTT	21665	30.716007	3
TTGATCG	8245	30.302485	5
TTTGATT	46870	29.47017	4
GTGTTTG	238875	29.46868	5
GATTTTT	18125	29.427309	7
TTTGATC	27675	28.988464	4
TGATTCC	9230	28.97276	6
CTTCCGA	2200	28.715218	4
TTGATTG	7160	28.59219	5
TTGAGGG	20155	27.453133	9