FastQCFastQC Report
Thu 23 Jun 2016
HJ5TMBCXX_l01n01_mesp_dnfgfr_10hpf_31_march.3510000005997f.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHJ5TMBCXX_l01n01_mesp_dnfgfr_10hpf_31_march.3510000005997f.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences51108
Sequences flagged as poor quality0
Sequence length51
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTGTCAA654.1623737E-420.76923211
Produced by FastQC (version 0.11.2)