HJ5M5BGXC_n01_GG075.fastq.gz FastQC Report

Summary

Basic Statistics
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Adapter Content
Kmer Content

Basic Statistics

Measure	Value
Filename	HJ5M5BGXC_n01_GG075.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	20106625
Sequences flagged as poor quality	0
Sequence length	76
%GC	46

Per base sequence quality

Per base quality graph

Per tile sequence quality

Per base quality graph

Per sequence quality scores

Per Sequence quality graph

Per base sequence content

Per base sequence content

Per sequence GC content

Per sequence GC content graph

Per base N content

N content graph

Sequence Length Distribution

Sequence length distribution

Sequence Duplication Levels

Duplication level graph

Overrepresented sequences

No overrepresented sequences

Adapter Content

Adapter graph

Kmer Content

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCGTATG	1730	0.0	15.376539	43
CGTATGC	1800	0.0	14.778342	44
CTCGTAT	1755	0.0	14.758729	42
TCTCGTA	1885	0.0	13.183823	41
TATGCCG	2000	0.0	12.949851	46
ACGGCTA	2320	0.0	12.0687065	32
ATGCCGT	2205	0.0	11.745837	47
ATCTCGT	2555	0.0	10.548559	40
TGCCGTC	2775	0.0	9.711455	48
CGGCTAC	2920	0.0	9.468998	33
CCGTCTT	3190	0.0	8.338276	50
CATCTCG	3295	0.0	8.285763	39
TCACGGC	3715	0.0	7.819191	30
GCCGTCT	3350	0.0	7.6266255	49
CGTCTTC	4065	0.0	6.6296077	51
GTATGCC	4570	0.0	6.509934	45
GTCACGG	4230	0.0	6.4535213	29
CACGGCT	4715	0.0	6.2351613	31
AGTCACG	4490	0.0	6.1577673	28