FastQCFastQC Report
Thu 20 May 2021
HHV25BGXJ_n02_S17_R1_F12-FD.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHHV25BGXJ_n02_S17_R1_F12-FD.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences22
Sequences flagged as poor quality0
Sequence length151
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTTGGAAGTATTGCGTTGGGGCTCGGTGGACGGTGCGGGTAGGCGCGCA14.545454545454546No Hit
GCATTGACAAAATATTTCTGAATGGTTACAAGAAAAATGCAACCCTCTGT14.545454545454546No Hit
AGGTACATTAGGTATGCTTCCTCCAGAGGGGATTTACTTTTGTTTCTGAG14.545454545454546No Hit
AGGTAGTTTTTTACTCTACCTCTATGTTGACAAAATGACCATCGTCAACA14.545454545454546No Hit
CCTTATTTCCTCAAATTTCTGTCCCAATTGCTCTCGCCACTTTTCATTTC14.545454545454546No Hit
GGTCTCCCATTCTCATCACAGTTTCTCCAAGCGAATCTCTGTATATTTTC14.545454545454546No Hit
AGGCGTGCGTGAAATAGTGTTTGCTTGTCGGTTAGGTGGTGAGCAGGGGT14.545454545454546No Hit
CTACTAGTGTCCAGTAATAGTTCATTCTCCCTTCTTGATCCCTCACTTTG14.545454545454546No Hit
ATAGGTTATCATGCGAACAATTCAACAGACACTGTAGACACAGTAATAGA14.545454545454546No Hit
CATTTGATGTTGATTCCATTCGATTCCATTTTATGATGATTCCATGCAAT14.545454545454546No Hit
TTATTTAGCTTAGCAACCTCTCAGATATCTGTTTAAACTTTGTAACTGAG14.545454545454546No Hit
AGGTTACTCTCCACCCCATCCCGCCCACGATAAGCCATGATGTCCTTGGG14.545454545454546No Hit
TCTTTAGATCGAATGGCCTAACAGCTAATGAGTCAGGAAGGCTAATAGAT14.545454545454546No Hit
AGGTGGGAGATCAATGGCCCTGAGTGAGTGGTAGTGAACAGTTATCATTG14.545454545454546No Hit
ATAGTTAAGTGCCCCACCACGCGTCCGGGGCGGGACCCGGGCGGGCCGCC14.545454545454546No Hit
GTTGTCTTTACTGTATATAGCCCATCCACTAACAGGGCAGAGAGAGGAAT14.545454545454546No Hit
TTGTTGAACATCTTGAATCTGCAGGTTTGTAGTGTTCATCAAATGTGGAA14.545454545454546No Hit
CTCTAGAACTACACATACTTAGATTATTTTACCTGTGTATTATAGGATTC14.545454545454546No Hit
AGACTCTATCAGATTGCACATGCATTAGATTTTGTGCCCACATGAACATA14.545454545454546No Hit
CTACCAGTAAAAATGAACTGGCGACAGTTGAATAGATCGCCAAAATCTGG14.545454545454546No Hit
CCCTAATGATAAGACAGGCAGTTGTGGTCCAGTATCGTCTAATGGAGCAA14.545454545454546No Hit
ATCTGATGGTCACCACTTAGCTTTTACACCAGAAGGAGAAGTCTGCAGTT14.545454545454546No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)