FastQCFastQC Report
Thu 20 May 2021
HHV25BGXJ_n02_S17_R1_E12-FD.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHHV25BGXJ_n02_S17_R1_E12-FD.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21
Sequences flagged as poor quality0
Sequence length151
%GC43

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTCAGTGGGAAGCCAGACCCGGGGCCTCATAGCAATGACCCTGGAATCA14.761904761904762No Hit
TCTATATATGGGTCCTCCTGTTTTCTTAGGGTCCTTCCCAGCACTGGGAT14.761904761904762No Hit
CCTGTAATCACAACATTTTTTGCCATCTTATTTCCTTCTATCTGGTGATT14.761904761904762No Hit
ATTACAGATTATTAAATTGAAGGAAGCAAATTTTTAAAAGATAAATTCGA14.761904761904762No Hit
GACTAGCACTGACTCAGGGCCATTGATCTCCCACATCATTGATGACGAAT14.761904761904762No Hit
CGCCCTACAGCGTGTTCGTGATCATCGCGCTGCTGTGCGGTTTCGGCGGC14.761904761904762No Hit
GATCAAAACCTGTCGTTTTGTAAGAATTACAAAAGAGCAAAGGTGTTTCC14.761904761904762No Hit
GAATGATGGATACCAGGGACTAAAGGTAGCTGGTCATGGGCAGTTACAGA14.761904761904762No Hit
CTAGCGAGGTAGTAGATATACATATACACCCCCCACACACTTATTTTTAT14.761904761904762No Hit
CTGGTGGGCTATGGCTATGGGTGGAGAAGCGCTTGGTGAATGTGGAGGCC14.761904761904762No Hit
TGCAAAAATGTTAGTTCTTCGAAACTATTCTCTGTCGGATTCTCTCAGAG14.761904761904762No Hit
GGTCTTTTCACATAGTCCCATATTTCTTGGAGGCTTTTTTCATTTCTTTT14.761904761904762No Hit
ATGTGCAATATCCTCAAAGGAAAATTTCAAACAGCTGCCCAGAGGGCAAT14.761904761904762No Hit
GCATAACAATAGAGAGGATGGTGCTTTCTGCTTTTGATGAGAGAAGAAAT14.761904761904762No Hit
GGGATGGTGCACCCTCGCCTTGCCATTATCCTGGAAACCACGGAGGCTTG14.761904761904762No Hit
GGGATTGCTCTTCGGTCGTATTGTCCTCTGAGGAGACCCAACGGTCGGGC14.761904761904762No Hit
GGTGGGGCGGGGTGAGGGGCCGGGGGGGCTTGCTGGGTGTAGCGGGTGGT14.761904761904762No Hit
GTGTTGAGCTTTTAATTTGGAATGATCAGTGTTGAGTTCTTCGGCAACTT14.761904761904762No Hit
AGAAGGTAAAACAAAACCATTATGTATCATTTCTCACATATCAGACTAGC14.761904761904762No Hit
TATGAATCCAATCCAACTGGAAAGTGCACAAGTTGAATAAATTATTTAAA14.761904761904762No Hit
GTTATCAAGCATGGTAATGCCAGCACTGCATAATTATCTTAATGTAATGC14.761904761904762No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)