FastQCFastQC Report
Thu 20 May 2021
HHV25BGXJ_n02_S17_R1_C12-FD.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHHV25BGXJ_n02_S17_R1_C12-FD.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10
Sequences flagged as poor quality0
Sequence length151
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGTGAATGCACCAAACCATGAGGGAATACAAGCAGGAGTGGACAGAT110.0No Hit
GATCTAGTTGTCGCCTTAATTGTGTGGGTGGAATAATTGGATTTTTGTAT110.0No Hit
GTTCACAATGGTTGGGAGAAGAGCAACAGCCATACTCAGAAAAGCAACCA110.0No Hit
GGATGACTTTCAGCTGATCCCAATGATAAGCAAATGTAGGACCAAAGAAG110.0No Hit
CTACAAATAGATGTGCCATAAGTGAGCTGGGGAGAATATCACTAAAAAGA110.0No Hit
GCAAAAGCAGGGGGAGCAGTAGAGGAAGAGGGAGAAGCAGGCTCCCCACC110.0No Hit
GATATTTACCTCCTCTGAAAAGTTTTAGTGCCAAATTGTGATTTGTATTT110.0No Hit
GAAGTGGGAGGCAGGTACTGGGGGATAAGGGGCAGGTGTGGAGGATGTGC110.0No Hit
ATATAATTGTATGACCTCACAATAGTGCCTATTGGCTTCAGTATTTAATG110.0No Hit
TAGCAATGGAGTTAATCAGAATGATCAAACGTGGAATCAATGACCGAAAT110.0No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)