FastQCFastQC Report
Thu 20 May 2021
HHV25BGXJ_n02_S12_R1_H11-FD.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHHV25BGXJ_n02_S12_R1_H11-FD.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences27
Sequences flagged as poor quality0
Sequence length151
%GC49

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATACGTAACTATGCGGCCGGAATGCCGCCATCCCTGGCGGCGTTCCCAGA27.4074074074074066No Hit
CTCCTGGATTGGGAAATGTGACATGGTCGACCGATTCAGGCGTCAGGTAT27.4074074074074066No Hit
CCTGTGCCAAGAGCCCTTTTGCTTGAATTGACGAATCGTACAACCTGAAT13.7037037037037033No Hit
GCCCTTTTGCTTGAATTGACGAATCGTACAACCTGAATAAAATGTCTATA13.7037037037037033No Hit
GCCGCCATCCCTGGCGGCGTTCCCAGAGGTGATACCTGACGCCTGAATCG13.7037037037037033No Hit
GAATTCCTACCACTGATCAGTCCCATCTTAAAACCTAACTCCCTTTGCTT13.7037037037037033No Hit
CTTTCGCTCCCCCCGGAGCGAAAGCAGGGGTGGGTCGATGATGGCAATGG13.7037037037037033No Hit
GACAAAAACCAAGAGTTCTCACATCCACAAAGCCTCAACACTACTAAAAA13.7037037037037033No Hit
CCATTATATGATGCAATCAAATGCATGAAGACATTCTTTGGCTGGAAAGA13.7037037037037033No Hit
GTCAGTGAGTGAGAACTCCATACTTACAAAGTTCACCACATCAGTATCAT13.7037037037037033No Hit
GTGGTATTCCCTCCCCCTCGTGACTCGGGTCTTCAATACTTAATTTCAGA13.7037037037037033No Hit
CAACAAGGCGGTGTGTTCATGTCGGCCTTCCTTGATCCAGCCACGGACAC13.7037037037037033No Hit
AAGCAGGGGTGACGGTCTCGCAAAGTTCAGTTTTCAAAGCAACCGCAGTA13.7037037037037033No Hit
TTCTTCTCCTTGTTGGCTGGGCCTGTGCCAAGAGCCCTTTTGCTTGAATT13.7037037037037033No Hit
CTCCTGGATTGGGAAATGTGACATGGTCGCCCGATTCAGGCGTCAGGTAT13.7037037037037033No Hit
GAATGCCGCCATCCCTGGCGGCGTTCCCAGAGGTGATACCTGACGCCTGA13.7037037037037033No Hit
ATCACAGAACTCTTCAAGAGCATGTGATAGAAAAGCACTATTCTAATTGA13.7037037037037033No Hit
CTTATGACTACCCAAAATACTCAGAGGAAGCAAAATTAAACAGAGAAGAA13.7037037037037033No Hit
GGTAGAGATTTAAAGATGAGTCATCAAACCGAGGTCGAAACGTACGTTCT13.7037037037037033No Hit
GTATAGACGTAACTATTTCGACACTGTCACATTTGCGCGGACACCAGAGT13.7037037037037033No Hit
TGATATGAGTAAGACCTGCTGTTGCATCTTCGCCATTGTTTGCTTGGCGC13.7037037037037033No Hit
ATAGAGGGGGACCACACCACACCTGATATTAAGAGAAGAACAACATACCA13.7037037037037033No Hit
AAGCAGGGGTGGGTCGATGATGGCAATGGGGGTCACGTGCATGTCGGTGA13.7037037037037033No Hit
ATATTCAATTCTATAGGCACAGGCACAGAGAAGGCAGAAAGTTGAATTTA13.7037037037037033No Hit
GGTCACGTGCATGTCGGTGATCTTCACGCGTTCTTCTCCTTGTTGGCTGG13.7037037037037033No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)