FastQCFastQC Report
Thu 20 May 2021
HHV25BGXJ_n02_S12_R1_A12-FD.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHHV25BGXJ_n02_S12_R1_A12-FD.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GATTGAAACTCATGAAACTCATGAGATAAAGGAGGAGGAATGTAGAAAAA211.11111111111111No Hit
GCGTAAAAGGCAATGAAAGAATATGGCGAAGATACGAAAATCGAAACTAA15.555555555555555No Hit
GCATTCTTTGGGATTATTTGGGTCACGGTTCAAAATTGCATAACGAGGAA15.555555555555555No Hit
ATTTTGCCCTCTAAAGTTTATGCCATTGGGTTTGCATTGATAGGTGATCT15.555555555555555No Hit
CATATGAATTCCTCCCTTTCCATACCATGCACAGGCCCTGCTTTACTTGG15.555555555555555No Hit
TATGTGTCCCTTGCCTCTCTCGGAATCTGTGGGCATCGTATTTAATGTCA15.555555555555555No Hit
GTGCATGCAAGATTATATCAAAATCTGATTCTTCTGGGAGACCCGAACCA15.555555555555555No Hit
TTCCTGAAGTCTGAGTCAAATTGGAGCTAATGTATGATGCTTATCTGGGA15.555555555555555No Hit
CACTGACTCAGGGCCATTGATCTCACACATCATTGATGACGAATAAGTTA15.555555555555555No Hit
TGAGCGAGGCGGAGAGTCTTCAGTAGTGAGTGTTGGGGCCGAATGTAGAT15.555555555555555No Hit
GTGGTGAGGACTGCCATGGTGTAGTCTGAGGAGTTTGTCTTCCTGATGAA15.555555555555555No Hit
ACAACAGACGTTGAGAAACTCGCCCAGCTGGAAGAGACCGACCTACTGTA15.555555555555555No Hit
CTGTAGGACAACAGGAATTTAAAGCCAGCTAAAGACACGTTTGTGAATCA15.555555555555555No Hit
ATCTTAAAGAGAGACAGACACACAAATACACTCTGAGACGCCACACCGTC15.555555555555555No Hit
CAGTTTTCAGGAATACTAAATTAGTTCTCTTTACTTTAATTCATTAGGAC15.555555555555555No Hit
CCATATTTGTATCTTGTGCACAGTTAATTATAACAATTTCCCAGTTAATG15.555555555555555No Hit
GAGCAAAAGCAGCCTGACAAAAACATAATGGACTCAAACACCCTCTCACC15.555555555555555No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)