FastQCFastQC Report
Thu 20 May 2021
HHV25BGXJ_n02_S12_R1_A10-FD.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHHV25BGXJ_n02_S12_R1_A10-FD.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences23
Sequences flagged as poor quality0
Sequence length151
%GC42

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TAGTTGTAAGGGGAAATTCTCCTGTATTCAACTATAACAAGGCAACGAAG14.3478260869565215No Hit
CAGTGAAAGCCCTTAGTAGTATAAAGGTCTCTAATAGGTTAAAGATTACA14.3478260869565215No Hit
ATCTTCTCCCCAACCCTGCAAAGGAAACCAAGCATTGACAAAATATTTCT14.3478260869565215No Hit
GTACTCACCAGTCACAGAAAAGCATCTTACGGATGGCATGACAGTAAGAG14.3478260869565215No Hit
GAAAATAATCAGAGATTAGCTTCGAGAAACTGTGATGAGAATGGGAGAAC14.3478260869565215No Hit
TCATTAATCAGGCACTCCTCGATTGCTTCATATAGCCCCCCAAGATCGAA14.3478260869565215No Hit
AGGTAATATATGTGGACTTCCCTCCGTGTTACTCCAATTTCAATGAACCG14.3478260869565215No Hit
GGGAGAATACTCAAAGGTGAAAAGATGATGATAAACACACAGTGAATAGC14.3478260869565215No Hit
CACTCGTGCATAGTGATGAGCATGCCACTGAGTCGGGTCAGCTCGGAGAG14.3478260869565215No Hit
TCCCCCTACTAGTGCTGACAAACAAAGTCTCTATCAGAATGAAGATGCAT14.3478260869565215No Hit
CCATTTGAATGGATGTCAATCCGACTCTACTTTTCCTAAATATTCCAGCG14.3478260869565215No Hit
CTGTTGGAGAGCGACAGGATGCCACAGAAATCAGAGAATCTGTCGGAAGA14.3478260869565215No Hit
CTCTCAGCCAGATGGCAAATAACACCAAACCACTAATAAGGCATGAAAAC14.3478260869565215No Hit
ATACAAGAGTGTTTTTTGAAACATCAAAAGAAAAATGGCCAAATAGATTT14.3478260869565215No Hit
GTATACATATTACAGAAATACAGTGTCTCCTTTAAAACGCCATCATTTCC14.3478260869565215No Hit
GATATACTTCAAGCAGTAGTTGTAAGGCTTGCATAAATGTTATTTTTTCG14.3478260869565215No Hit
CAATTGGTGTGGATGGCATGCACCTCTGCTGCAGTTGAAGATTTAAGAGT14.3478260869565215No Hit
GCTGCTAGGAACATAGTGAGAAGAGCTGCAGTATCAGCAGATCCACTAGC14.3478260869565215No Hit
CTGGTAGGCCTGCAAATATTCAAGCAGGTCATCTTTCATACCAGCACTGG14.3478260869565215No Hit
GTAGATATTTAAAGATGAGTCTTCTAACCGAGGTCGAAACGTACGTTCTT14.3478260869565215No Hit
ATATAAGAGAAAGTCTAAGACCCCTTTAATCAGATATTGATGACGTCATA14.3478260869565215No Hit
GAGCATAAGGAGGTACTGATCCTAAATGGATGAGTTTGTGCCACAATCAT14.3478260869565215No Hit
GAATAATGGACATGATTCCAGAGAGGAATGAACAAGGACAAACCCTCTGG14.3478260869565215No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)