FastQCFastQC Report
Thu 20 May 2021
HHV25BGXJ_n02_S12_R1_A07-FD.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHHV25BGXJ_n02_S12_R1_A07-FD.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences22
Sequences flagged as poor quality0
Sequence length151
%GC42

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGTTCACGCTCACCGTGCCCAGTGAGCGAGGACTGCAGCGTAGACGCTT14.545454545454546No Hit
CATAATTTATGTATGTTTAAAAAGGGAATGTGGGTCATTCTGAAAAATGG14.545454545454546No Hit
GTTCACAATGGTTGGGAGAAGAGCAACAGCCATACTCAGAAAAGCAACCA14.545454545454546No Hit
GCAAAAGCAGGTCAATTATATTCAATATGGAAAGAATAAAAGAACTAAGA14.545454545454546No Hit
TTTTAAAACTAATCGACACTAATTGATGGCCATCCGAATTCGTTTGGTCG14.545454545454546No Hit
CTCATGCACTCTTATCTTCAATGTTTGAAGATTGCCCGTAAGCACCTCTT14.545454545454546No Hit
TCCTAAGGCAGACCCCAACAGTAGCGAAAGCCGTGGATATATGCAAGCCT14.545454545454546No Hit
GAGCAAAAGCAGGTCAATTATATTCAATATGGAAAGAATAAAAGAACTAA14.545454545454546No Hit
TAGCACATTAGCCTTCTCTCCTGTCGCAAGGTTGCTCAGTTCAGTGAAGC14.545454545454546No Hit
GTGTGTACATTGAAGTGTTGCATTTGACTCAAGGAACATGCTGGGAACAG14.545454545454546No Hit
TCACAATGGTTGGGAGAAGAGCAACAGCCATACTCAGAAAAGCAACCAGG14.545454545454546No Hit
AGCAAAAGCAGGTACTGATCCAAAATGGAAGACTTTGTGCGACAATGCTT14.545454545454546No Hit
TTTTTAAACTATTCGACACTAATTGATGGCCATCCGAATTCTTTTGGTCG14.545454545454546No Hit
ATGTGGGAGATTAATGGTCCTGAATCAGTGATGGTAAATACCTATCAATG14.545454545454546No Hit
AATTCTCTCCTTTCGCAAGCTTGCGCAGTTCCTTTATGCTTATTTCTTGC14.545454545454546No Hit
GTTCATTGATGCTTAGTGCTGGCCCATATTTCCGTTATCCTCTTGTCTGC14.545454545454546No Hit
CTCTTATCTTCAATGTTTGAAGATTGCCCGTAAGCACCTCTTCCTCTCTC14.545454545454546No Hit
GAATTAGGATGGTAGACATCATTAGGCATAACCCAACAGAAGAGCAAGCC14.545454545454546No Hit
TTCTCCAAGCGAATCTCTGTATATTTTCAGAGACTCGACCCGTGTTACCA14.545454545454546No Hit
ACTTCAAGCAGTAGTTGTAAGGCTTGCATAAATGTTATTTGTTCGAAACT14.545454545454546No Hit
TTAGTAGAAACAAGGCATTTTTTCATGAAGGACAAGTTAAATTCATTATT14.545454545454546No Hit
GGAGGTGTCACTAAGCTATTCAACTGGTGCACTTGCCAGTTGCATGGGCC14.545454545454546No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)