FastQCFastQC Report
Thu 20 May 2021
HHV25BGXJ_n01_S17_R1_H12-FD.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHHV25BGXJ_n01_S17_R1_H12-FD.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9
Sequences flagged as poor quality0
Sequence length151
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATCAATATAAAGCAAGAAGTTAAAGCCGGAAATACCAATAAGACAAAAA111.11111111111111No Hit
GGAGGCACAGGATGTGATTATGGAAGTTGTTTTCCCAAATGAAGTGGGGG111.11111111111111No Hit
GAACAGGATACACCATGGACACAGTAAACAGAACACACCAATACTCAGAA111.11111111111111No Hit
TCGTGGCTCAGCCAGAGGACGAGGATGTCCATACTGCTCTGGAGCGCGGT111.11111111111111No Hit
CTCACATTCACAGTCAATGAGGAAAATTGCATCCTACTCTGTTCTGGTGG111.11111111111111No Hit
AAGGAACAAGAACCAACCAGTTTTAGGAGAATGGTTGCCTTGGGAGAGTG111.11111111111111No Hit
GGTACGGCCGCTGTCAGCTCCAATTCCTGGCGCGCATGTCGAATCCTGTG111.11111111111111No Hit
CTTATGAGGATGTCAAAAATGCAGTTGGGGTCCTCATCGGAGGACTTGAA111.11111111111111No Hit
CCATTCGTTTCGATTCCTTTCCATTCCAGCCCATTCCATTACATTCCATT111.11111111111111No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)