FastQCFastQC Report
Thu 20 May 2021
HHV25BGXJ_n01_S17_R1_G12-FD.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHHV25BGXJ_n01_S17_R1_G12-FD.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences22
Sequences flagged as poor quality0
Sequence length151
%GC43

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTCTAGTATAATTCGAAGTTCGCTAATGTGATGCCTCCAGATTTGTACTT29.090909090909092No Hit
GCATTTTTTCATGTGTTTTTTGGCTGCATAAATGTCTTCTTTTGAGAAGT29.090909090909092No Hit
CTACAACAACATCATGGCCCTCTACCTGAAGACCAAGGGCGACTTCATCC14.545454545454546No Hit
ACCCCTCACTATGAAAATTACTGTTTTGTATGACTTTAATTTTGGAGAAA14.545454545454546No Hit
TCCCCCCGGTCATCTCAAAAGAAAAGATCCAGTGTTTTGAGAAGGGCATG14.545454545454546No Hit
ATTCCGCTGCACTGAGAATGTAGGCTGCACACTGATCTGGCCTGCGGATG14.545454545454546No Hit
TAATTGTATTTCCCATGTCTAATTCTTACCCTTTTTTGGTCATGTTTTTG14.545454545454546No Hit
GTTATCTCTCTGTCCTCCTAACCCCCATCTCTGGCCCCTCAGATTTAGAG14.545454545454546No Hit
AGCGAAAGCAGGGGTGATGTTCATGGCCTGGGGGGATGGTTCATCAATAC14.545454545454546No Hit
CTCTATATATTGCTTACTCAAACTTTGTTGAGTGCCTGCTACTACTCTAC14.545454545454546No Hit
TCTCTGTGTCTTGTGAATTAGTCATCATCTTTCTCACAACATTTGCCAGT14.545454545454546No Hit
GAAGCATACAAGGCTGTTCTTGAGGGAATGAATGGTAAACCAGTGGTTGT14.545454545454546No Hit
ATCCTGAGCTCTGGAGTGACGACTAGATCCAGAAGCATACAAGGCACATA14.545454545454546No Hit
GGGGGGGGGGGGGGGTGGCGCACGGGCGCTGTGAGATCGGGGTGAGGTTT14.545454545454546No Hit
GAAATTACAAATTTCAAATAACAAGTCTCAACTATGCCATGACTAATAAA14.545454545454546No Hit
CATGTACTCTTATTTTCAGTGTTTGGAGGTTGCCCGTTAGCACTTCTTCT14.545454545454546No Hit
GTGTATGTATGGCACGTGTGACAGGAGTGTGGCTGAGACAGGGAGGGAGA14.545454545454546No Hit
CCGCTGTTCTGAGGGGATTCCTCATTCTGGGCAAAGAAGACAAGAGATAT14.545454545454546No Hit
CACAAGTATGACTTAAATATCTACTCTTAGTTCTTAAGTTGCATAACGTG14.545454545454546No Hit
CTGCCTGGCTGTCAGTAAGTATGCTAGAGTCCCGGTTTCGTTTCATTACC14.545454545454546No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)