FastQCFastQC Report
Thu 20 May 2021
HHV25BGXJ_n01_S17_R1_F12-FD.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHHV25BGXJ_n01_S17_R1_F12-FD.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences22
Sequences flagged as poor quality0
Sequence length151
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATGGGTGCAGTTTGCTCCTGCAGGAGAAGTGGCCGGAGGACCTGTCGC14.545454545454546No Hit
CTGAAAATATACAGAGATTCGCTTGGAGAAACTGTGATGAGAATGGGAGA14.545454545454546No Hit
TACCTGGAGTCCCTCCAAAACAAACTGGGGTGGGTGGTATAGGGAATATA14.545454545454546No Hit
GGTGTAAAGTGAAGACAGGAATGCCTTTCTTCGCTGGCAGGATTTTGCAT14.545454545454546No Hit
ATTCTACACTGTAGAGACCCATTAGAACACATCCAGAAACTGATTGCCCC14.545454545454546No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG14.545454545454546No Hit
GTGCTGGCTAGCACTACGGCAAAGGCTATGGAACAGATGGCTGGATCGAG14.545454545454546No Hit
GTCTTATACAATCCAGCCCTGTTAGTTCTGGATGCTGAACAAAACTCCCG14.545454545454546No Hit
ACCATATCAGGGTACCTCAAGATTTCCACTTGCATCGAATGTAATATTTT14.545454545454546No Hit
GTCAATAACTAAAAAGAACAGAGGGTTGCATTTTTCTTGTAACAATTAAG14.545454545454546No Hit
GGCTCTGCTCGTTCTGCTGCTGCACCTGCTGGCGCAAATCCAGGATGGCC14.545454545454546No Hit
GTTTTTTAATTTGGAGTGTGTGTAATGTGCGTTGGACCTCCCGCATTTGC14.545454545454546No Hit
GAGCAAAAGCAGGAGTTTAAAATGAATCCAAACCAAAAGATAATAACCAT14.545454545454546No Hit
GGCTAGTTAAAAAAGGAAATTCATACCCAAAGCTCAGCAAATCCTACATT14.545454545454546No Hit
GATATAAAGTGCAGTGAACAGGGGAGACAAAAGAGGGGCCAGTCAGTTTT14.545454545454546No Hit
CCTTGATACTACTAAGGGCTTTCACTGAGGAGGGAGCAATAGTTGGAGAA14.545454545454546No Hit
CTATTGTTCTTTGCGTGACCATCTTCTTGGTAATGTTGTCTCTTAATATC14.545454545454546No Hit
GGGGTTGTGTGAGGATGGTGGGGGGCGCCGGGGAATTCCGCAGTGCCAAG14.545454545454546No Hit
ACTTATATGAAAAGGTAAGAAGCAAGCTAAAAAACAATGCCAAGGAAATT14.545454545454546No Hit
GTCATACCTTACTAAGGCATTAACATAATACTAAGCAGAAGTCACAAATA14.545454545454546No Hit
GGTATCAACACCAAACGGAAAAAAACGGAATTATCGAATGGAATCGAAGA14.545454545454546No Hit
GTATTTAAAAAAAAAAAAAAAAAAAAAGAAGGGAAAGAAGAAAAGAGAAA14.545454545454546No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)