FastQCFastQC Report
Thu 20 May 2021
HHV25BGXJ_n01_S17_R1_E12-FD.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHHV25BGXJ_n01_S17_R1_E12-FD.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21
Sequences flagged as poor quality0
Sequence length151
%GC43

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATTTGCTTGTTTGAAATTTGCTTCTTCGAATTTATCTTTTAAAAATTTG14.761904761904762No Hit
GAAGAAGCTGATGTTGGACATCGAGGAGGCGAAGTTGCCGCCGCCGAAAC14.761904761904762No Hit
GATTAACTCCATTGCTATTGTTCCAACTCCTTTCACCGCAGCACCTGAGG14.761904761904762No Hit
ATCCAATCTCCACAACATACTCATCTTGCAAAACACAAATAATCTAAATC14.761904761904762No Hit
GGTCTATCCCGACCAGTGAGTACCCTTCCCTTTAAAAGTCATGCCCACTT14.761904761904762No Hit
CTTCAGTGAAATCTTTAACCGATTAGAGACCTTCAAACTACTAAGGGCTT14.761904761904762No Hit
CTCAAACTCAGTGATTATGATGGACGACTAATCCAGAATAGCATAACAAT14.761904761904762No Hit
TGCTTCAATAATATTGAAAAAGGAAGAGTATGATTATTCAACATTTCCGT14.761904761904762No Hit
CTCCTAATGCGCGTCTTGGGTTGAAAACCATTGTAGCTCTTCCTGGAGCT14.761904761904762No Hit
TTAAAATACTATTATATAATTATTTATAGTAAAAGACTTTTGGGGGAACT14.761904761904762No Hit
CGAACAAATGAGTACAAGTGTAAGTGGGGAAATCTCAACCAGACTGATGG14.761904761904762No Hit
CTTCTAACCGAGGTCGAAACGTACGTTCTTTCTATCATCCCGTCAGGCCC14.761904761904762No Hit
GTGCAATGGTGGTTCAAGAAGTTTTACAAAGCAGATGAGAGCCTTGAAGA14.761904761904762No Hit
CTCCAGCACGGAGAGAGTGGTAGTGAGTATTGACCGATTTTTAAGGGTTA14.761904761904762No Hit
GTTTATAGAAAGGGCCTTCGAGATAGATTCCTAGAAATGGGATAGCTGAA14.761904761904762No Hit
GTTGAGAGAAGAAGCCTTCAGATGATCAAACTACTCCAAGCTAAAGGAGG14.761904761904762No Hit
GAGCAGATGTACACTCCAGGAGGAGAAGTGAGAAATGATGATGTTGACCA14.761904761904762No Hit
GTAGGATGTGGTGGGGCATGTCTGAGAAAGACACCCTCAGCCACTGTCCT14.761904761904762No Hit
GCAAAAGCAGGTGTGGGACAGTGAAGAAACCGTCTTTCTTCCTCTTCTTA14.761904761904762No Hit
AAAAAAAGATATCTTTAGTCCGCTTGTCCATAACGTGATCTCATCTATAA14.761904761904762No Hit
GTACTGCTACTTCCAAAACTCAAACACGACTTGAAGGTGAAACGAATTCT14.761904761904762No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)