FastQCFastQC Report
Thu 20 May 2021
HHV25BGXJ_n01_S12_R1_A12-FD.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHHV25BGXJ_n01_S12_R1_A12-FD.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18
Sequences flagged as poor quality0
Sequence length151
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGCAGCTATAATAATATACCTACAAATTGGATGGCTTAGAGGAACAGAA211.11111111111111No Hit
CAGAAAGGTAGCGCGAAGTAGGTACAGAAGCAATTGTCATTATAAGTGTC15.555555555555555No Hit
GTAGAATTTTTTCTGAAATATGTATAATAGTTCAGTTCAAATCACAGTGT15.555555555555555No Hit
TTATGTGATTGTCTTATTTCGTTCCATTCTAAAGGATTTCCACTGGACAA15.555555555555555No Hit
GTCTTTCAGTATTACGATGTAAAACTACAGACTTTGCCATAGAAGGAAGT15.555555555555555No Hit
AGGTAATATATGTGGACTTCCCTCCGTGTTACTCCAATTTCAATGAACCG15.555555555555555No Hit
CTTAATGGGGGTCGAACACTGGTACACAGCTCAAGTGATGGACATATTGA15.555555555555555No Hit
GCTTACCAGAATTCAGCGTAGAAAACACATACCAGCAGCCATGCTCTACC15.555555555555555No Hit
GAATAAGAGAGGCTATCTAATAAGATCCCTTACATTAAATACGATGAAAA15.555555555555555No Hit
TGATATGACTTCTGCAGAGTCACAAGGTTAATTAGCAGAAGATTAAGGTA15.555555555555555No Hit
TAATAAAGCCTAATGCAAACCCATGGAGTCACAGTCTGTGCAGATGAAGA15.555555555555555No Hit
GCAAGAAGGGGAGTGTTGTGACTAGCTGTGTATTTGCTTATACTTTGAAA15.555555555555555No Hit
CTGCAGTAGCTCATATACCTCTTCTTTATTGAGAAGTCAATAATATAAGT15.555555555555555No Hit
TCTTAATAATTTTCATGTCCTTTTATTTCTGGTCAAGCCAGAGAAACACA15.555555555555555No Hit
TAATAAGGGAGGAAAATGGTAATAGAGAAATAGAAAGAGCAAGAAGTGAA15.555555555555555No Hit
GTGGCCATGGTATTCTCACAGGAGGATTGCATGATCAAGGCAGTTAGGGG15.555555555555555No Hit
GGGCAAACCATCTACTGAAACAAATGCACAAACTCTTGCTGCATTTCACA15.555555555555555No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)