FastQCFastQC Report
Thu 20 May 2021
HHV25BGXJ_n01_S12_R1_A07-FD.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHHV25BGXJ_n01_S12_R1_A07-FD.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences22
Sequences flagged as poor quality0
Sequence length151
%GC42

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GAAGTACACATCAGGAAGACAGGAGAAGAACCCAGCACTTAGGATGAAAT14.545454545454546No Hit
CCCTTATACTGGAGATCCTCCATACAGCCATGGAACAGGAACAGGATACA14.545454545454546No Hit
GCCATAATCAAGAAGTACACATCAGGAAGACAGGAGAAGAACCCAGCACA14.545454545454546No Hit
CTTTATTGGAGATGTGCCACAGCACACAGATTGGTGGAATTAGGATGGTA14.545454545454546No Hit
GTATGCTAGAGTCCCGTTTCCGTTTCATTACCAACACCACGTCTCCTTGC14.545454545454546No Hit
GTGCTAGCCAGCACCATTCTGTTTTCATGCCTGATTAGGGATTGGTGGTA14.545454545454546No Hit
GGAGTGTAGGGTTCTGGGACCACTGAATTTTAACAGTTTCCCAGTTTATG14.545454545454546No Hit
CACCCATTTTGCTGATTCTCAATCCTCTCATTCACATCTCGATGCTTGGA14.545454545454546No Hit
CAGCTGTGCCTTCATCTGGGTCTTCAGTTAAAGTGCCAGCATCCTTTCCG14.545454545454546No Hit
TCTCCTGTCTTCCTGATGTGTACTTCTTGATTATGGCCATATGGTCAACG14.545454545454546No Hit
GTAGTACATTTACTCGTTGGTCCCGGATTCTCAAAAAACGGTCAATGCTC14.545454545454546No Hit
AATTTCTCCTTTGATGGTTGCATACATGTTGGAGAGAGAACTGGTCCGCA14.545454545454546No Hit
AGTCGCAGTCTCGCACCCGCGAGATACTCACAAAACAAACCGTGGACAAT14.545454545454546No Hit
AGCAAAAGCAGGTCAATTATATTCAATATGGAAAGAATAAAAGAACTAAG14.545454545454546No Hit
TATATGTGGAGAGGAGGAACCAGGAAGGAGATAGAATGTTCATGCTGGTT14.545454545454546No Hit
CCGTGCTGGAGTACTCATCTACACCCATTTTGCTGATTCTCACTCCTCTC14.545454545454546No Hit
GAGCAAAAGAATGTAAATTATATTCAATATGTAAATAATAAAAGACATAA14.545454545454546No Hit
TCCTTCAATTATCTCAAATCGGTGCTTCAATAGTGCATTCGGGTCACCAG14.545454545454546No Hit
AGCCGGCACCATTCTGTTTTCATGCCTGATTAGTGGATTGGTGGTAGTAG14.545454545454546No Hit
CATTGCAGCCTTGCATATATCCACGGCTTGCTCTTCTGTTGGGTTCTGCC14.545454545454546No Hit
GGACCAGGCGATCATGGAAAAGAACATAGTACTGAAAGCGAACTTCAGTG14.545454545454546No Hit
GGAGGAAGCAATAGTTGGAGAAATTTCACCATTACCTTCTCTTCCAGGAC14.545454545454546No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)