FastQCFastQC Report
Thu 20 May 2021
HHV25BGXJ_n01_S12_R1_A04-FD.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHHV25BGXJ_n01_S12_R1_A04-FD.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences89
Sequences flagged as poor quality0
Sequence length151
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTGTATGGGTGTGTGTTCCCCTGTCCCCAGACCCTGAGTCCCAAGGGGC22.247191011235955No Hit
GTTTTGTAGGTAGCACTGGAAGGCAGGGGTCCTTTTTCCATTTGAATAGG11.1235955056179776No Hit
CCTCATCGGTGGTGGCAGCACTATCCTTCTGACACACAAACAAGTTAAAG11.1235955056179776No Hit
CATATAGCCCATTGTGGAGTTGTCCCGAAGGGCCTGGGCTTTCATGATCC11.1235955056179776No Hit
GCAAACGCAGGGTGACAAAAACATAATGGACTCCCACACCATGTCAAGCT11.1235955056179776No Hit
GACCAAAAGTATGAACTTTCACAGATAATATAAATTTAAAATCAGAGGCT11.1235955056179776No Hit
GTTCAAGGCCATCAAGCACCAGGTGGAGAAGGGGCCAGTCGACGCTGTGC11.1235955056179776No Hit
CTGTGGTATTATTTAAATAAAAACTGAATTTCAACAGCAAATAATGACTG11.1235955056179776No Hit
GATAGATGGAGTTGTTCTCTTGTAAGTCTCTGTTGGGCTGTTCGTTGCCG11.1235955056179776No Hit
ATATATGACAGAGCCTATTGACGAGTACCGCGTGCAGCAACTCAAGGAGT11.1235955056179776No Hit
GAGTAGCACTACCAGATGGAACAACAGTTACAGTCAGGGTTAAAAAGAAC11.1235955056179776No Hit
AAAATATACAGAGATTCGATTGGAGAAAAAGTGATCAGAATGGGAGACCA11.1235955056179776No Hit
GCAAAAGCAGGGTCGCATCGTGGTCTTTCAGTATTCCGATGGAAAACTAC11.1235955056179776No Hit
GCACCTGCACCTGCTTCTGCACCTGCTCCTGTTCGTGCTCCTGTTCCTGC11.1235955056179776No Hit
CCCTGACACCATCCCCGTCTTCCCTCCTCCTACCCCCAGGCCAGAAGGCA11.1235955056179776No Hit
CTCCCATTTTGCTGACTCTTATCCCTCTCAGCGACATCTCCGTGCTTGGG11.1235955056179776No Hit
CTTCTGGTAGTAGTAGCACACATCGGTCTTGCGCTTGGATGGGAGGAACC11.1235955056179776No Hit
ACACAGCCCCGCTAGAGTCTCAAAAGGCACTTTGACCTAATGTCCCACAA11.1235955056179776No Hit
TCCCTTTGGCAGCCACCAACTCTCTGCATTTGAAAGTCTGGTTCATTTGT11.1235955056179776No Hit
GGTGTCACTAAGCTATTCAACTGGTGCACTTGCCAGTTGCATGGGCCTCA11.1235955056179776No Hit
GTTAACTGACTGAGCCACCCTGGTGCCCCAATAGTGCTAACGGTATTAAA11.1235955056179776No Hit
GTTTTTGCTTTACTTTAGAATTTCTGTCAGTTGAGAATATGTCTCTTCAT11.1235955056179776No Hit
GTGTTGGACTCCTCCTCCTCTCCCAAACAAAGCACTATGCGCACTATCTC11.1235955056179776No Hit
CATTTAAACACATTCAGTCTGCTCTTGTCCTCCTCGGAAACAATGCATAT11.1235955056179776No Hit
AGGTCGGTCTCTTCCACCTGGGCGAGTTTGTCAACGTCTTTTGTCACGGC11.1235955056179776No Hit
CCCTGGGACCATGACCTGAGCCGAAGGTGGACACTTAAACCACTCAACTG11.1235955056179776No Hit
TAGTGACACCTCCTTGGCCCCATGGAACGTTATTTCTCTTTTGAGCTTCT11.1235955056179776No Hit
GGCAACACCCTTGGCCTCGATATCGAAACAGCCACTCTTGTTGGGAAACA11.1235955056179776No Hit
AAACATGGGTGTTTTTTATCATTAAATAAGCTGAAACGAGAAAGCTCTTA11.1235955056179776No Hit
ATCCAGCCATCTGTTCCATAGCCTTTGCCGTAGTGCTAGCCAGCACCATT11.1235955056179776No Hit
GTTGTATTGCAATCGTGGACTGGTGTATCTGAAATGATAATACCAGATCC11.1235955056179776No Hit
GGAATGGGGACCCGAACAACATGGATAGAGCAGTTAAACTATACAAGAAG11.1235955056179776No Hit
GTATGACAGTGATGAGCCAGAGCCCAGATCTCTAGCAAGCTGGGTACAAA11.1235955056179776No Hit
GATGTATATTCTGAAATGGGAGGCTGGTGTTTATAGCACCCTTGGGTGTT11.1235955056179776No Hit
TCTCCGTGCTTGGGGTCATGTCGGGCAGTATTCCGATCATTCCCATCACA11.1235955056179776No Hit
CGCAAAGAGGGCCTATTATCTTTTGCCTAGGCATGAGCATGAACCAGTCT11.1235955056179776No Hit
AGCTAGTCCAGCAGACTCGGAGGGTAAGACAGTCCCGTTCTGGTTAGGTA11.1235955056179776No Hit
ATGTCAGATAGACCATTGTGGTTTTAGATGGTAGGAATATTAAGAACTAC11.1235955056179776No Hit
TTAATAGAAAGATGCTGATAAATACCTTGGGTGTACAGACATATGAAATC11.1235955056179776No Hit
GAGTGCAATCACTACAACAACATCATGGCCCTCTACCTGAAGACCAAGGG11.1235955056179776No Hit
TCTCTCTCTCCCACTCCTTTCTTACTAAACCCTTTCTTCCTTTCCTGTCC11.1235955056179776No Hit
GGGAGGACGTGATTCACCTTTGGTCTGTGCATGTGGATCAAAATGGACTT11.1235955056179776No Hit
CACCTTGAGAGATCCGTGCTAGTCCACTTGGGCAGCTCTGGGAGGAGCAG11.1235955056179776No Hit
ATGCCTTAGTTGGGATAATCATAGCTTTGGTCTCAAGTCTCATTGTACCT11.1235955056179776No Hit
GAACATAGTACTGAAAGCGAGCTTCAGTGTAATCTTTAACCGATTAGAGA11.1235955056179776No Hit
CAGTGCTGCTGCTTGCCTACAAGCCCATGGAGGGGAACTTTGAAGAGATC11.1235955056179776No Hit
CACCCAAAATGTTCTCAAACAAAATGGCAAGACTAGGGAAAGGGTACATC11.1235955056179776No Hit
GTCTTTATAGTGGTAGTTGGAAAAACAACAATGCCAACAACAACACAACA11.1235955056179776No Hit
GCCTATTGACGAGTACTGCGTGCAGCAACTCAAGGAGTTTGATGGGAAGA11.1235955056179776No Hit
TCTAGGAACAGGATGATTTTCTCACGCTGTAAGTGGGGAGACCAAGCACT11.1235955056179776No Hit
TTCTGGAGCCAGCCCCTGTGGTTCGGAGTGCTCCCACTCGCCATGGCAAC11.1235955056179776No Hit
GGCCCCTCCCACTCTGCGGGGGCTGGTGGAATTCCAAGACGTCTCTTTTG11.1235955056179776No Hit
TCCGGAGAGTGTACCCCGAACGTGAGCGTGTCTGTGAACACCAGCCACAC11.1235955056179776No Hit
GTTGTATATGAGGCCCATGCAACTGGCAAGTGCACCAGTTGAATAGCTTA11.1235955056179776No Hit
CTATTAAGTCTGTTTTCACATTCGCCGCCTTCTCCTTTCCCAAGAGAAGG11.1235955056179776No Hit
GCTCCTGTACCGCCCAGGATGCAGAGAGGGGCGACAACAATCATGCTGGG11.1235955056179776No Hit
CCAGTGGGGGGTGGGGGGGACTGCAGCTCAGCCTAAGATAAGGAGGGCTG11.1235955056179776No Hit
ACTACCACCAATCCACTAATCGGGCATGAAAACAGAATGGTGCTGGCTAG11.1235955056179776No Hit
GTATCCCCCTTTGTACTAGATTATTTCATTCAGCATGTATCAATGATCAA11.1235955056179776No Hit
AGATTTTCTTGACCCAGAGCCTCCACTGAAGCCTCAGCCAAGGCAGCGTC11.1235955056179776No Hit
GCATATCTTGTTGATTCGGTACCCCCCCTTATGGTGATCATTCTCTCGCC11.1235955056179776No Hit
AGTGTTTACTGCACTGTTCCCATGTGTATGTGTGTACACAGCCCAAAGTT11.1235955056179776No Hit
GCTCTGGAGGTAGTGAAGGTCCCCCATTCTCATCACAGTTTCTCCAAGCG11.1235955056179776No Hit
ATATATGACAGAGCCTATTGACGAGTACTGCGTGCAGCAACTCAAGGAGT11.1235955056179776No Hit
CGCCACCTTTCCCTCCAGGGCTGCCAAAGCTGAGCTGTTTTCCCCCCCTG11.1235955056179776No Hit
GTTATTTTGTCTCCCGGCTCTACTAGTGTCCAGTAATAGTTCATTCTCCC11.1235955056179776No Hit
GCCGACAGCGGGGGAGAAAGTCAGATGAGTTCCCCTCTCCCACTCTCCTG11.1235955056179776No Hit
ATCTTAAGCAGGCTCCCCACCCAACACGGAACCCCACGCGGGGCTCAATC11.1235955056179776No Hit
GTCTGATTTCTCATCATCGCTATCTTTGCGTTCTTCAGTCTCTCCTCTTG11.1235955056179776No Hit
CCTGAGGATAATGAACCAAGTGGGTATGAACAAACAGACCTGTCTCTTAT11.1235955056179776No Hit
ATGTAATGGAATCATTGAACAAAGAGGAAATAGAGATAACAACCCACTTT11.1235955056179776No Hit
CCCATATATAGAAGAGTAGACAGAAAGTGGATGAGAGAACTTATCCTTTA11.1235955056179776No Hit
GGTTAAAACAGACTGAAATTGATTCTTTTTCTGTCTTCCCACGTGTCCAC11.1235955056179776No Hit
AAGCCATTCAAGTGTTTCACTCCTAAAGGTTCATCTCTCAAGATAGAAGA11.1235955056179776No Hit
CAGAGAGAGTATCTCTTCACATGTATGAGTCTAAATTCCTCTACTAACCA11.1235955056179776No Hit
GTGTTACCATTCCATTCAAGTCCTCCGATGAGGACCCCAACTGCATTTTT11.1235955056179776No Hit
GCTCTCTGGTCATGCAGAACCTGGGCGAGACTTCAACCCCCACGCAGGGC11.1235955056179776No Hit
GAATGGTGCCATTTCTAACAATGCCATAGTTCTCTGATGTTTTTAAATCT11.1235955056179776No Hit
GTCCTGGCAAGGATGCGGAGGTAGAGAAACTAGAACACTTAAAATTCTGC11.1235955056179776No Hit
ATTCCCAGGTCTCCAGTGAACTGGTTTTAGTTCAAAGAAATCCCCATTTT11.1235955056179776No Hit
CCCATCTACTCTTGGGGTCAGTTGAGAGCCCCCTCGCTCCTGGGTTCACG11.1235955056179776No Hit
TTAAAGTATGGGGCCTCTTGGGGTGCCTGCTGGCACACTTGAGCATATAT11.1235955056179776No Hit
GAGTTCTCTGTGGACCTCTCTGGAGTCTCTCAAGGAATTCCACCACTGTC11.1235955056179776No Hit
CCCTGTGTTCTGCGCCTTGGTCAACGGCGAAGGAGAAGTGACAGACTTCC11.1235955056179776No Hit
GTTTTCTACAAGTTGTATTACTTTAGGAATCAGAAAAAAGTCATATGCTT11.1235955056179776No Hit
GACCAAAGATTTACTGGTCATCGAAACACTCAAGCCGAGTTGTTGATCAA11.1235955056179776No Hit
GGATGAAAACAGTGCGGCGCGCTACCTGACTAAGAAGGCTCGGGTGGGTT11.1235955056179776No Hit
AAACAAACAAACCAACAAACCCAATCATGACTTTGTCCTGAAGAACTCAA11.1235955056179776No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)