HHTNVBGXB_n02_CA290_4.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HHTNVBGXB_n02_CA290_4.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	62485955
Sequences flagged as poor quality	0
Sequence length	55
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAGCAGTGGTATCAACGCAGAGTACATGGGGGACTTCCCGTGTGGCTCACAACAT	507952	0.8129058762085016	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGAGGCAGGCATTGAGGCAGCGAGCG	299390	0.4791316704689878	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCAGGCATTGAGGCAGCGAGCGC	239570	0.3833981572338936	No Hit
GCAGTGGTATCAACGCAGAGTACATGGGGGACTTCCCGTGTGGCTCACAACATAA	115530	0.1848895483793118	No Hit
GTGGTATCAACGCAGAGTACATGGGGGACTTCCCGTGTGGCTCACAACATAACTA	80678	0.12911381445638465	No Hit
GCAGTGGTATCAACGCAGAGTACATGGGGAGGCAGGCATTGAGGCAGCGAGCGCA	76407	0.12227867846462458	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AAGCAGT	909240	47.539288	1
AGCAGTG	1019955	42.323414	2
GCAGTGG	1320770	32.66432	3
AGTGGTA	1373355	31.435833	5
CAGTGGT	1468745	29.404198	4
GTGGTAT	1511615	28.529907	6
TGGTATC	1508985	28.506674	7
GGTATCA	1545210	27.832157	8
GTATCAA	1557970	27.602076	9
TATCAAC	1562800	27.500923	10
ATCAACG	1574530	27.278221	11
TCAACGC	1577295	27.176281	12
CAACGCA	1585125	27.045946	13
AACGCAG	1599335	26.855434	14
ACGCAGA	1603040	26.791939	15
AGAGTAC	1598715	26.516695	19
GCAGAGT	1612315	26.4799	17
CAGAGTA	1609610	26.45435	18
GAGTACA	1599420	26.442532	20
AGTACAT	1592980	26.35219	21