[2023-08-21 11:21:12,495] multiqc [DEBUG ] No MultiQC config found: /share/apps/multiqc/1.9/lib/python3.8/site-packages/multiqc_config.yaml [2023-08-21 11:21:12,495] multiqc [DEBUG ] No MultiQC config found: /home/gencore/.multiqc_config.yaml [2023-08-21 11:21:12,495] multiqc [DEBUG ] No MultiQC config found: multiqc_config.yaml [2023-08-21 11:21:12,497] multiqc [DEBUG ] Loading config settings from: /home/gencore/SCRIPTS/hpcpipe/mqc_config.yaml [2023-08-21 11:21:12,497] multiqc [DEBUG ] New config 'report_section_order': {'general_stats': {'order': 1000}, 'demux_report': {'order': 900}, 'demux_report-1': {'order': 900}, 'demux_report-2': {'order': 900}, 'undetermined_barcodes': {'order': 800}, 'run_stats': {'order': 700}, 'fastqc': {'order': 500}} [2023-08-21 11:21:12,498] multiqc [DEBUG ] Command used: /share/apps/multiqc/1.9/bin/multiqc -f -c /home/gencore/SCRIPTS/hpcpipe/mqc_config.yaml /scratch/gencore/logs/html/HHMVCDRX3/merged [2023-08-21 11:21:13,509] multiqc [WARNING] MultiQC Version v1.15 now available! [2023-08-21 11:21:13,510] multiqc [INFO ] This is MultiQC v1.9 [2023-08-21 11:21:13,510] multiqc [DEBUG ] Command : /share/apps/multiqc/1.9/bin/multiqc -f -c /home/gencore/SCRIPTS/hpcpipe/mqc_config.yaml /scratch/gencore/logs/html/HHMVCDRX3/merged [2023-08-21 11:21:13,510] multiqc [DEBUG ] Working dir : /scratch/gencore/logs/html/HHMVCDRX3/merged [2023-08-21 11:21:13,510] multiqc [INFO ] Template : default [2023-08-21 11:21:13,510] multiqc [DEBUG ] Running Python 3.8.6 (default, Oct 11 2020, 20:34:31) [GCC Intel(R) C++ gcc 8.3.1 mode] [2023-08-21 11:21:13,510] multiqc [INFO ] Searching : /scratch/gencore/logs/html/HHMVCDRX3/merged [2023-08-21 11:21:13,510] multiqc [DEBUG ] Analysing modules: custom_content, conpair, peddy, somalier, methylQA, mosdepth, phantompeakqualtools, qualimap, preseq, quast, qorts, rna_seqc, rockhopper, rsem, rseqc, busco, goleft_indexcov, disambiguate, supernova, deeptools, sargasso, verifybamid, mirtrace, happy, mirtop, homer, macs2, theta2, snpeff, gatk, htseq, bcftools, featureCounts, fgbio, dragen, dedup, damageprofiler, biobambam2, mtnucratio, picard, prokka, samblaster, samtools, sexdeterrmine, bamtools, jellyfish, vcftools, longranger, stacks, varscan2, bbmap, bismark, biscuit, hicexplorer, hicup, hicpro, salmon, kallisto, slamdunk, star, hisat2, tophat, bowtie2, bowtie1, snpsplit, kat, leehom, adapterRemoval, clipandmerge, cutadapt, flexbar, kaiju, kraken, malt, trimmomatic, sickle, skewer, sortmerna, biobloomtools, fastq_screen, afterqc, fastp, fastqc, pycoqc, minionqc, multivcfanalyzer, clusterflow, bcl2fastq, interop, ivar, flash, seqyclean [2023-08-21 11:21:13,510] multiqc [DEBUG ] Using temporary directory for creating report: /state/partition1/job-36715709/tmp3sdfi3rr [2023-08-21 11:21:13,640] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HHMVCDRX3_n01_S2_D3_PBMC_GEX_fastqc.html [2023-08-21 11:21:13,642] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HHMVCDRX3_n01_S2_D3_PBMC_GEX_fastqc.html [2023-08-21 11:21:13,705] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HHMVCDRX3_n01_S3_D7_PBMC_BCell_fastqc.html [2023-08-21 11:21:13,707] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HHMVCDRX3_n01_S3_D7_PBMC_BCell_fastqc.html [2023-08-21 11:21:13,762] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HHMVCDRX3_n02_S4_D28_PBMC_SP_fastqc.html [2023-08-21 11:21:13,764] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HHMVCDRX3_n02_S4_D28_PBMC_SP_fastqc.html [2023-08-21 11:21:13,823] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HHMVCDRX3_n01_S2_D3_PBMC_SP_fastqc.html [2023-08-21 11:21:13,825] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HHMVCDRX3_n01_S2_D3_PBMC_SP_fastqc.html [2023-08-21 11:21:13,877] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HHMVCDRX3_n01_S4_D28_PBMC_TCell_fastqc.html [2023-08-21 11:21:13,879] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HHMVCDRX3_n01_S4_D28_PBMC_TCell_fastqc.html [2023-08-21 11:21:13,934] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HHMVCDRX3_n02_undetermined_fastqc.html [2023-08-21 11:21:13,936] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HHMVCDRX3_n02_undetermined_fastqc.html [2023-08-21 11:21:14,020] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HHMVCDRX3_n02_S2_D3_PBMC_GEX_fastqc.html [2023-08-21 11:21:14,022] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HHMVCDRX3_n02_S2_D3_PBMC_GEX_fastqc.html [2023-08-21 11:21:14,078] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HHMVCDRX3_n01_S3_D7_PBMC_GEX_fastqc.html [2023-08-21 11:21:14,080] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HHMVCDRX3_n01_S3_D7_PBMC_GEX_fastqc.html [2023-08-21 11:21:14,155] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HHMVCDRX3_n01_S2_D3_PBMC_BCell_fastqc.html [2023-08-21 11:21:14,156] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HHMVCDRX3_n01_S2_D3_PBMC_BCell_fastqc.html [2023-08-21 11:21:14,217] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HHMVCDRX3_n02_S2_D3_PBMC_SP_fastqc.html [2023-08-21 11:21:14,219] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HHMVCDRX3_n02_S2_D3_PBMC_SP_fastqc.html [2023-08-21 11:21:14,287] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HHMVCDRX3_n02_S4_D28_PBMC_GEX_fastqc.html [2023-08-21 11:21:14,289] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HHMVCDRX3_n02_S4_D28_PBMC_GEX_fastqc.html [2023-08-21 11:21:14,347] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HHMVCDRX3_n01_S3_D7_PBMC_SP_fastqc.html [2023-08-21 11:21:14,348] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HHMVCDRX3_n01_S3_D7_PBMC_SP_fastqc.html [2023-08-21 11:21:14,413] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HHMVCDRX3_n02_S3_D7_PBMC_GEX_fastqc.html [2023-08-21 11:21:14,415] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HHMVCDRX3_n02_S3_D7_PBMC_GEX_fastqc.html [2023-08-21 11:21:14,580] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HHMVCDRX3_n01_S4_D28_PBMC_GEX_fastqc.html [2023-08-21 11:21:14,582] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HHMVCDRX3_n01_S4_D28_PBMC_GEX_fastqc.html [2023-08-21 11:21:14,644] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HHMVCDRX3_n02_S3_D7_PBMC_TCell_fastqc.html [2023-08-21 11:21:14,646] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HHMVCDRX3_n02_S3_D7_PBMC_TCell_fastqc.html [2023-08-21 11:21:14,705] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HHMVCDRX3_n01_S3_D7_PBMC_TCell_fastqc.html [2023-08-21 11:21:14,707] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HHMVCDRX3_n01_S3_D7_PBMC_TCell_fastqc.html [2023-08-21 11:21:14,767] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HHMVCDRX3_n02_S2_D3_PBMC_BCell_fastqc.html [2023-08-21 11:21:14,769] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HHMVCDRX3_n02_S2_D3_PBMC_BCell_fastqc.html [2023-08-21 11:21:14,821] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HHMVCDRX3_n01_S4_D28_PBMC_SP_fastqc.html [2023-08-21 11:21:14,823] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HHMVCDRX3_n01_S4_D28_PBMC_SP_fastqc.html [2023-08-21 11:21:14,878] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HHMVCDRX3_n02_S4_D28_PBMC_TCell_fastqc.html [2023-08-21 11:21:14,880] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HHMVCDRX3_n02_S4_D28_PBMC_TCell_fastqc.html [2023-08-21 11:21:14,942] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HHMVCDRX3_n02_S4_D28_PBMC_BCell_fastqc.html [2023-08-21 11:21:14,944] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HHMVCDRX3_n02_S4_D28_PBMC_BCell_fastqc.html [2023-08-21 11:21:15,020] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HHMVCDRX3_n02_S3_D7_PBMC_SP_fastqc.html [2023-08-21 11:21:15,022] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HHMVCDRX3_n02_S3_D7_PBMC_SP_fastqc.html [2023-08-21 11:21:15,104] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HHMVCDRX3_n01_S2_D3_PBMC_TCell_fastqc.html [2023-08-21 11:21:15,106] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HHMVCDRX3_n01_S2_D3_PBMC_TCell_fastqc.html [2023-08-21 11:21:15,167] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HHMVCDRX3_n02_S2_D3_PBMC_TCell_fastqc.html [2023-08-21 11:21:15,169] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HHMVCDRX3_n02_S2_D3_PBMC_TCell_fastqc.html [2023-08-21 11:21:15,228] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HHMVCDRX3_n01_undetermined_fastqc.html [2023-08-21 11:21:15,230] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HHMVCDRX3_n01_undetermined_fastqc.html [2023-08-21 11:21:15,286] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HHMVCDRX3_n01_S4_D28_PBMC_BCell_fastqc.html [2023-08-21 11:21:15,288] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HHMVCDRX3_n01_S4_D28_PBMC_BCell_fastqc.html [2023-08-21 11:21:15,370] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HHMVCDRX3_n02_S3_D7_PBMC_BCell_fastqc.html [2023-08-21 11:21:15,372] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HHMVCDRX3_n02_S3_D7_PBMC_BCell_fastqc.html [2023-08-21 11:21:15,843] multiqc.plots.bargraph [DEBUG ] Using matplotlib version 3.3.2 [2023-08-21 11:21:15,845] multiqc.plots.linegraph [DEBUG ] Using matplotlib version 3.3.2 [2023-08-21 11:21:15,858] multiqc.modules.custom_content.custom_content [INFO ] demux_report: Found 13 samples (table) [2023-08-21 11:21:15,861] multiqc.modules.custom_content.custom_content [INFO ] run_stats: Found 1 samples (table) [2023-08-21 11:21:15,870] multiqc.modules.custom_content.custom_content [INFO ] undetermined_barcodes: Found 20 samples (table) [2023-08-21 11:21:15,876] multiqc [DEBUG ] No samples found: conpair [2023-08-21 11:21:15,882] multiqc [DEBUG ] No samples found: peddy [2023-08-21 11:21:15,888] multiqc [DEBUG ] No samples found: somalier [2023-08-21 11:21:15,894] multiqc [DEBUG ] No samples found: methylQA [2023-08-21 11:21:15,904] multiqc [DEBUG ] No samples found: mosdepth [2023-08-21 11:21:15,908] multiqc [DEBUG ] No samples found: phantompeakqualtools [2023-08-21 11:21:15,912] multiqc [DEBUG ] No samples found: qualimap [2023-08-21 11:21:15,918] multiqc [DEBUG ] No samples found: preseq [2023-08-21 11:21:15,924] multiqc [DEBUG ] No samples found: quast [2023-08-21 11:21:15,930] multiqc [DEBUG ] No samples found: qorts [2023-08-21 11:21:15,934] multiqc [DEBUG ] No samples found: rna_seqc [2023-08-21 11:21:15,939] multiqc [DEBUG ] No samples found: rockhopper [2023-08-21 11:21:15,945] multiqc [DEBUG ] No samples found: rsem [2023-08-21 11:21:15,957] multiqc [DEBUG ] No samples found: rseqc [2023-08-21 11:21:15,962] multiqc [DEBUG ] No samples found: busco [2023-08-21 11:21:15,967] multiqc [DEBUG ] No samples found: goleft_indexcov [2023-08-21 11:21:15,972] multiqc [DEBUG ] No samples found: disambiguate [2023-08-21 11:21:15,977] multiqc [DEBUG ] No samples found: supernova [2023-08-21 11:21:15,990] multiqc [DEBUG ] No samples found: deeptools [2023-08-21 11:21:15,995] multiqc [DEBUG ] No samples found: sargasso [2023-08-21 11:21:16,000] multiqc [DEBUG ] No samples found: verifybamid [2023-08-21 11:21:16,005] multiqc [DEBUG ] No samples found: mirtrace [2023-08-21 11:21:16,010] multiqc [DEBUG ] No samples found: happy [2023-08-21 11:21:16,015] multiqc [DEBUG ] No samples found: mirtop [2023-08-21 11:21:16,022] multiqc [DEBUG ] No samples found: homer [2023-08-21 11:21:16,027] multiqc [DEBUG ] No samples found: macs2 [2023-08-21 11:21:16,032] multiqc [DEBUG ] No samples found: theta2 [2023-08-21 11:21:16,037] multiqc [DEBUG ] No samples found: snpeff [2023-08-21 11:21:16,044] multiqc [DEBUG ] No samples found: gatk [2023-08-21 11:21:16,049] multiqc [DEBUG ] No samples found: htseq [2023-08-21 11:21:16,055] multiqc [DEBUG ] No samples found: bcftools [2023-08-21 11:21:16,060] multiqc [DEBUG ] No samples found: featureCounts [2023-08-21 11:21:16,066] multiqc [DEBUG ] No samples found: fgbio [2023-08-21 11:21:16,079] multiqc [DEBUG ] No samples found: dragen [2023-08-21 11:21:16,084] multiqc [DEBUG ] No samples found: dedup [2023-08-21 11:21:16,089] multiqc [DEBUG ] No samples found: damageprofiler [2023-08-21 11:21:16,113] multiqc [DEBUG ] No samples found: biobambam2 [2023-08-21 11:21:16,117] multiqc [DEBUG ] No samples found: mtnucratio [2023-08-21 11:21:16,119] multiqc [DEBUG ] No samples found: picard [2023-08-21 11:21:16,124] multiqc [DEBUG ] No samples found: prokka [2023-08-21 11:21:16,128] multiqc [DEBUG ] No samples found: samblaster [2023-08-21 11:21:16,137] multiqc [DEBUG ] No samples found: samtools [2023-08-21 11:21:16,142] multiqc [DEBUG ] No samples found: sexdeterrmine [2023-08-21 11:21:16,147] multiqc [DEBUG ] No samples found: bamtools [2023-08-21 11:21:16,151] multiqc [DEBUG ] No samples found: jellyfish [2023-08-21 11:21:16,159] multiqc [DEBUG ] No samples found: vcftools [2023-08-21 11:21:16,165] multiqc [DEBUG ] No samples found: longranger [2023-08-21 11:21:16,172] multiqc [DEBUG ] No samples found: stacks [2023-08-21 11:21:16,177] multiqc [DEBUG ] No samples found: varscan2 [2023-08-21 11:21:16,191] multiqc [DEBUG ] No samples found: bbmap [2023-08-21 11:21:16,196] multiqc [DEBUG ] No samples found: bismark [2023-08-21 11:21:16,202] multiqc [DEBUG ] No samples found: biscuit [2023-08-21 11:21:16,207] multiqc [DEBUG ] No samples found: hicexplorer [2023-08-21 11:21:16,212] multiqc [DEBUG ] No samples found: hicup [2023-08-21 11:21:16,217] multiqc [DEBUG ] No samples found: hicpro [2023-08-21 11:21:16,222] multiqc [DEBUG ] No samples found: salmon [2023-08-21 11:21:16,226] multiqc [DEBUG ] No samples found: kallisto [2023-08-21 11:21:16,232] multiqc [DEBUG ] No samples found: slamdunk [2023-08-21 11:21:16,237] multiqc [DEBUG ] No samples found: star [2023-08-21 11:21:16,243] multiqc [DEBUG ] No samples found: hisat2 [2023-08-21 11:21:16,249] multiqc [DEBUG ] No samples found: tophat [2023-08-21 11:21:16,254] multiqc [DEBUG ] No samples found: bowtie2 [2023-08-21 11:21:16,260] multiqc [DEBUG ] No samples found: bowtie1 [2023-08-21 11:21:16,266] multiqc [DEBUG ] No samples found: snpsplit [2023-08-21 11:21:16,271] multiqc [DEBUG ] No samples found: kat [2023-08-21 11:21:16,275] multiqc [DEBUG ] No samples found: leehom [2023-08-21 11:21:16,280] multiqc [DEBUG ] No samples found: adapterRemoval [2023-08-21 11:21:16,285] multiqc [DEBUG ] No samples found: clipandmerge [2023-08-21 11:21:16,289] multiqc [DEBUG ] No samples found: cutadapt [2023-08-21 11:21:16,294] multiqc [DEBUG ] No samples found: flexbar [2023-08-21 11:21:16,300] multiqc [DEBUG ] No samples found: kaiju [2023-08-21 11:21:16,305] multiqc [DEBUG ] No samples found: kraken [2023-08-21 11:21:16,310] multiqc [DEBUG ] No samples found: malt [2023-08-21 11:21:16,315] multiqc [DEBUG ] No samples found: trimmomatic [2023-08-21 11:21:16,321] multiqc [DEBUG ] No samples found: sickle [2023-08-21 11:21:16,326] multiqc [DEBUG ] No samples found: skewer [2023-08-21 11:21:16,330] multiqc [DEBUG ] No samples found: sortmerna [2023-08-21 11:21:16,334] multiqc [DEBUG ] No samples found: biobloomtools [2023-08-21 11:21:16,339] multiqc [DEBUG ] No samples found: fastq_screen [2023-08-21 11:21:16,344] multiqc [DEBUG ] No samples found: afterqc [2023-08-21 11:21:16,349] multiqc [DEBUG ] No samples found: fastp [2023-08-21 11:21:18,368] multiqc.modules.fastqc.fastqc [INFO ] Found 26 reports [2023-08-21 11:21:18,586] multiqc [DEBUG ] No samples found: pycoqc [2023-08-21 11:21:18,591] multiqc [DEBUG ] No samples found: minionqc [2023-08-21 11:21:18,598] multiqc [DEBUG ] No samples found: multivcfanalyzer [2023-08-21 11:21:18,604] multiqc [DEBUG ] No samples found: clusterflow [2023-08-21 11:21:18,608] multiqc [DEBUG ] No samples found: bcl2fastq [2023-08-21 11:21:18,614] multiqc [DEBUG ] No samples found: interop [2023-08-21 11:21:18,619] multiqc [DEBUG ] No samples found: ivar [2023-08-21 11:21:18,625] multiqc [DEBUG ] No samples found: flash [2023-08-21 11:21:18,631] multiqc [DEBUG ] No samples found: seqyclean [2023-08-21 11:21:18,631] multiqc [DEBUG ] Reordering sections: anchor 'general_stats' not found. [2023-08-21 11:21:18,631] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-1' not found. [2023-08-21 11:21:18,631] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-2' not found. [2023-08-21 11:21:18,631] multiqc [DEBUG ] Reordering sections: anchor 'general_stats' not found for module 'Demultiplexing Report'. [2023-08-21 11:21:18,631] multiqc [DEBUG ] Reordering sections: anchor 'demux_report' not found for module 'Demultiplexing Report'. [2023-08-21 11:21:18,631] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-2' not found for module 'Demultiplexing Report'. [2023-08-21 11:21:18,631] multiqc [DEBUG ] Reordering sections: anchor 'undetermined_barcodes' not found for module 'Demultiplexing Report'. [2023-08-21 11:21:18,631] multiqc [DEBUG ] Reordering sections: anchor 'run_stats' not found for module 'Demultiplexing Report'. [2023-08-21 11:21:18,631] multiqc [DEBUG ] Reordering sections: anchor 'fastqc' not found for module 'Demultiplexing Report'. [2023-08-21 11:21:18,631] multiqc [DEBUG ] Reordering sections: anchor 'general_stats' not found for module ' Barcodes of Undetermined Reads'. [2023-08-21 11:21:18,631] multiqc [DEBUG ] Reordering sections: anchor 'demux_report' not found for module ' Barcodes of Undetermined Reads'. [2023-08-21 11:21:18,631] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-1' not found for module ' Barcodes of Undetermined Reads'. [2023-08-21 11:21:18,631] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-2' not found for module ' Barcodes of Undetermined Reads'. [2023-08-21 11:21:18,631] multiqc [DEBUG ] Reordering sections: anchor 'undetermined_barcodes' not found for module ' Barcodes of Undetermined Reads'. [2023-08-21 11:21:18,631] multiqc [DEBUG ] Reordering sections: anchor 'run_stats' not found for module ' Barcodes of Undetermined Reads'. [2023-08-21 11:21:18,631] multiqc [DEBUG ] Reordering sections: anchor 'fastqc' not found for module ' Barcodes of Undetermined Reads'. [2023-08-21 11:21:18,631] multiqc [DEBUG ] Reordering sections: anchor 'general_stats' not found for module 'Run Statistics'. [2023-08-21 11:21:18,631] multiqc [DEBUG ] Reordering sections: anchor 'demux_report' not found for module 'Run Statistics'. [2023-08-21 11:21:18,631] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-1' not found for module 'Run Statistics'. [2023-08-21 11:21:18,631] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-2' not found for module 'Run Statistics'. [2023-08-21 11:21:18,631] multiqc [DEBUG ] Reordering sections: anchor 'undetermined_barcodes' not found for module 'Run Statistics'. [2023-08-21 11:21:18,631] multiqc [DEBUG ] Reordering sections: anchor 'run_stats' not found for module 'Run Statistics'. [2023-08-21 11:21:18,631] multiqc [DEBUG ] Reordering sections: anchor 'fastqc' not found for module 'Run Statistics'. [2023-08-21 11:21:18,631] multiqc [DEBUG ] Reordering sections: anchor 'general_stats' not found for module 'FastQC'. [2023-08-21 11:21:18,631] multiqc [DEBUG ] Reordering sections: anchor 'demux_report' not found for module 'FastQC'. [2023-08-21 11:21:18,631] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-1' not found for module 'FastQC'. [2023-08-21 11:21:18,632] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-2' not found for module 'FastQC'. [2023-08-21 11:21:18,632] multiqc [DEBUG ] Reordering sections: anchor 'undetermined_barcodes' not found for module 'FastQC'. [2023-08-21 11:21:18,632] multiqc [DEBUG ] Reordering sections: anchor 'run_stats' not found for module 'FastQC'. [2023-08-21 11:21:18,632] multiqc [DEBUG ] Reordering sections: anchor 'fastqc' not found for module 'FastQC'. [2023-08-21 11:21:18,663] multiqc [INFO ] Compressing plot data [2023-08-21 11:21:19,095] multiqc [INFO ] Report : multiqc_report.html [2023-08-21 11:21:19,095] multiqc [INFO ] Data : multiqc_data [2023-08-21 11:21:19,095] multiqc [DEBUG ] Moving data file from '/state/partition1/job-36715709/tmp3sdfi3rr/multiqc_data' to '/scratch/gencore/logs/html/HHMVCDRX3/merged/multiqc_data' [2023-08-21 11:21:19,226] multiqc [INFO ] MultiQC complete