FastQCFastQC Report
Thu 3 Mar 2022
HHMNLAFX3_n01_dpr518.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHHMNLAFX3_n01_dpr518.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6
Sequences flagged as poor quality0
Sequence length76
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCAGAAGACAGCAATGAAAAAATCACAAAATCTAATGCCATCAACTGGAA116.666666666666664No Hit
CCCACAAGTAGGTGGGCACTGAGTAGAGGTTGCTGGTCTGCTGGGGAAAG116.666666666666664No Hit
GGCACCAGAAGTACCCAGTTATCAAAAATGCACACACATCCCGTGGCATC116.666666666666664No Hit
GGCCGGGGTAGCGCTGACACCAAGACTGATCCACGGCCATCATATTTAGG116.666666666666664No Hit
GGAGAAACAGATTTTAAAGGAGAAACTTCTAGTATCGGATCAAATCGTAA116.666666666666664No Hit
GCTCTAGACCAGACTGGTAGTTTTATGTTGTTCTCAGTTGTAAAAACTCT116.666666666666664No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)