Sample adapter_content Sequences flagged as poor quality sequence_duplication_levels avg_sequence_length Encoding per_base_sequence_quality sequence_length_distribution Sequence length File type basic_statistics per_sequence_gc_content Total Sequences per_base_n_content per_base_sequence_content overrepresented_sequences %GC total_deduplicated_percentage Filename kmer_content per_sequence_quality_scores per_tile_sequence_quality HHLM5AFXY_n01_r4zt14tcs12 fail 0.0 pass 76.0 Sanger / Illumina 1.9 pass pass 76.0 Conventional base calls pass fail 6.0 pass fail fail 46.0 100.0 HHLM5AFXY_n01_r4zt14tcs12.fastq.gz pass warn HHLM5AFXY_n01_r4zt14tcs20 pass 0.0 pass 76.0 Sanger / Illumina 1.9 pass pass 76.0 Conventional base calls pass fail 2.0 pass fail fail 36.0 100.0 HHLM5AFXY_n01_r4zt14tcs20.fastq.gz pass warn HHLM5AFXY_n01_r4zt14tcs26 pass 0.0 pass 76.0 Sanger / Illumina 1.9 pass pass 76.0 Conventional base calls pass warn 1.0 pass fail fail 46.0 100.0 HHLM5AFXY_n01_r4zt14tcs26.fastq.gz pass warn HHLM5AFXY_n01_r4zt14tcs29 fail 0.0 pass 76.0 Illumina 1.3 pass pass 76.0 Conventional base calls pass fail 1.0 pass fail fail 59.0 100.0 HHLM5AFXY_n01_r4zt14tcs29.fastq.gz pass fail HHLM5AFXY_n01_r4zt14tcs32 fail 0.0 pass 76.0 Sanger / Illumina 1.9 pass pass 76.0 Conventional base calls pass fail 1.0 pass fail fail 51.0 100.0 HHLM5AFXY_n01_r4zt14tcs32.fastq.gz pass pass HHLM5AFXY_n01_r4zt14tcs4 pass 0.0 pass 76.0 Sanger / Illumina 1.9 pass pass 76.0 Conventional base calls pass warn 1.0 pass fail fail 42.0 100.0 HHLM5AFXY_n01_r4zt14tcs4.fastq.gz pass warn HHLM5AFXY_n01_r4zt14tcs44 pass 0.0 pass 76.0 Sanger / Illumina 1.9 pass pass 76.0 Conventional base calls pass fail 3.0 pass fail fail 37.0 100.0 HHLM5AFXY_n01_r4zt14tcs44.fastq.gz pass warn HHLM5AFXY_n01_r4zt14tcs45 pass 0.0 pass 76.0 Illumina 1.3 pass pass 76.0 Conventional base calls pass fail 2.0 pass fail fail 50.0 100.0 HHLM5AFXY_n01_r4zt14tcs45.fastq.gz pass fail HHLM5AFXY_n01_r4zt14tcs5 pass 0.0 pass 76.0 Illumina 1.3 pass pass 76.0 Conventional base calls pass fail 4.0 pass fail fail 61.0 100.0 HHLM5AFXY_n01_r4zt14tcs5.fastq.gz pass fail HHLM5AFXY_n01_r4zt14tcs52 pass 0.0 pass 76.0 Sanger / Illumina 1.9 pass pass 76.0 Conventional base calls pass fail 1.0 pass fail fail 60.0 100.0 HHLM5AFXY_n01_r4zt14tcs52.fastq.gz pass warn HHLM5AFXY_n01_r4zt14tcs58 pass 0.0 pass 76.0 Sanger / Illumina 1.9 pass pass 76.0 Conventional base calls pass fail 1.0 pass fail fail 44.0 100.0 HHLM5AFXY_n01_r4zt14tcs58.fastq.gz pass pass HHLM5AFXY_n01_r4zt14tcs60 pass 0.0 pass 76.0 Sanger / Illumina 1.9 pass pass 76.0 Conventional base calls pass warn 2.0 pass fail fail 61.0 100.0 HHLM5AFXY_n01_r4zt14tcs60.fastq.gz pass warn HHLM5AFXY_n01_r4zt14tcs61 fail 0.0 pass 76.0 Sanger / Illumina 1.9 pass pass 76.0 Conventional base calls pass warn 1.0 pass fail fail 50.0 100.0 HHLM5AFXY_n01_r4zt14tcs61.fastq.gz pass pass HHLM5AFXY_n01_r4zt14tcs68 pass 0.0 pass 76.0 Sanger / Illumina 1.9 pass pass 76.0 Conventional base calls pass fail 2.0 pass fail fail 40.0 100.0 HHLM5AFXY_n01_r4zt14tcs68.fastq.gz pass warn HHLM5AFXY_n01_r4zt14tcs69 fail 0.0 pass 76.0 Illumina 1.3 pass pass 76.0 Conventional base calls pass fail 1.0 pass fail fail 55.0 100.0 HHLM5AFXY_n01_r4zt14tcs69.fastq.gz pass fail HHLM5AFXY_n01_r4zt14tcs76 pass 0.0 pass 76.0 Sanger / Illumina 1.9 pass pass 76.0 Conventional base calls pass fail 1.0 pass fail fail 52.0 100.0 HHLM5AFXY_n01_r4zt14tcs76.fastq.gz pass warn HHLM5AFXY_n01_r4zt14tcs82 pass 0.0 pass 76.0 Sanger / Illumina 1.9 pass pass 76.0 Conventional base calls pass fail 1.0 pass fail fail 64.0 100.0 HHLM5AFXY_n01_r4zt14tcs82.fastq.gz pass warn HHLM5AFXY_n01_r4zt14tcs84 pass 0.0 pass 76.0 Sanger / Illumina 1.9 pass pass 76.0 Conventional base calls pass fail 1.0 pass fail fail 80.0 100.0 HHLM5AFXY_n01_r4zt14tcs84.fastq.gz pass warn HHLM5AFXY_n01_r4zt14tcs85 fail 0.0 pass 76.0 Sanger / Illumina 1.9 pass pass 76.0 Conventional base calls pass fail 1.0 pass fail fail 63.0 100.0 HHLM5AFXY_n01_r4zt14tcs85.fastq.gz pass pass HHLM5AFXY_n01_r4zt14tcs90 fail 0.0 pass 76.0 Illumina 1.3 pass pass 76.0 Conventional base calls pass warn 1.0 pass fail fail 53.0 100.0 HHLM5AFXY_n01_r4zt14tcs90.fastq.gz pass fail HHLM5AFXY_n01_r4zt14tcs92 pass 0.0 pass 76.0 Sanger / Illumina 1.9 pass pass 76.0 Conventional base calls pass warn 1.0 pass fail fail 57.0 100.0 HHLM5AFXY_n01_r4zt14tcs92.fastq.gz pass warn HHLM5AFXY_n01_r4zt14trps10 pass 0.0 pass 76.0 Illumina 1.3 pass pass 76.0 Conventional base calls pass fail 1.0 pass fail fail 59.0 100.0 HHLM5AFXY_n01_r4zt14trps10.fastq.gz pass fail HHLM5AFXY_n01_r4zt14trps18 pass 0.0 pass 76.0 Sanger / Illumina 1.9 pass pass 76.0 Conventional base calls pass warn 1.0 pass fail fail 32.0 100.0 HHLM5AFXY_n01_r4zt14trps18.fastq.gz pass warn HHLM5AFXY_n01_r4zt14trps20 pass 0.0 pass 76.0 Sanger / Illumina 1.9 pass pass 76.0 Conventional base calls pass fail 4.0 pass fail fail 31.0 100.0 HHLM5AFXY_n01_r4zt14trps20.fastq.gz pass warn HHLM5AFXY_n01_r4zt14trps34 pass 0.0 pass 76.0 Illumina 1.3 pass pass 76.0 Conventional base calls pass warn 1.0 pass fail fail 67.0 100.0 HHLM5AFXY_n01_r4zt14trps34.fastq.gz pass fail HHLM5AFXY_n01_r4zt14trps37 pass 0.0 pass 76.0 Illumina 1.3 pass pass 76.0 Conventional base calls pass fail 2.0 pass fail fail 71.0 100.0 HHLM5AFXY_n01_r4zt14trps37.fastq.gz pass fail HHLM5AFXY_n01_r4zt14trps42 pass 0.0 pass 76.0 Illumina 1.3 pass pass 76.0 Conventional base calls pass fail 1.0 pass fail fail 56.0 100.0 HHLM5AFXY_n01_r4zt14trps42.fastq.gz pass fail HHLM5AFXY_n01_r4zt14trps52 pass 0.0 pass 76.0 Sanger / Illumina 1.9 pass pass 76.0 Conventional base calls pass fail 1.0 pass fail fail 23.0 100.0 HHLM5AFXY_n01_r4zt14trps52.fastq.gz pass warn HHLM5AFXY_n01_r4zt14trps53 fail 0.0 pass 76.0 Illumina 1.3 pass pass 76.0 Conventional base calls pass fail 1.0 pass fail fail 64.0 100.0 HHLM5AFXY_n01_r4zt14trps53.fastq.gz pass fail HHLM5AFXY_n01_r4zt14trps58 fail 0.0 pass 76.0 Sanger / Illumina 1.9 pass pass 76.0 Conventional base calls pass warn 1.0 pass fail fail 57.0 100.0 HHLM5AFXY_n01_r4zt14trps58.fastq.gz pass pass HHLM5AFXY_n01_r4zt14trps60 fail 0.0 pass 76.0 Sanger / Illumina 1.9 pass pass 76.0 Conventional base calls pass fail 3.0 pass fail fail 43.0 100.0 HHLM5AFXY_n01_r4zt14trps60.fastq.gz pass warn HHLM5AFXY_n01_r4zt14trps68 pass 0.0 pass 76.0 Sanger / Illumina 1.9 pass pass 76.0 Conventional base calls pass fail 3.0 pass fail fail 32.0 100.0 HHLM5AFXY_n01_r4zt14trps68.fastq.gz pass warn HHLM5AFXY_n01_r4zt14trps76 fail 0.0 pass 76.0 Sanger / Illumina 1.9 pass pass 76.0 Conventional base calls pass fail 3.0 pass fail fail 45.0 100.0 HHLM5AFXY_n01_r4zt14trps76.fastq.gz pass pass HHLM5AFXY_n01_r4zt14trps78 pass 0.0 pass 76.0 Sanger / Illumina 1.9 pass pass 76.0 Conventional base calls pass fail 1.0 pass fail fail 35.0 100.0 HHLM5AFXY_n01_r4zt14trps78.fastq.gz pass pass HHLM5AFXY_n01_r4zt14trps84 fail 0.0 pass 76.0 Sanger / Illumina 1.9 pass pass 76.0 Conventional base calls pass fail 3.0 pass fail fail 50.0 100.0 HHLM5AFXY_n01_r4zt14trps84.fastq.gz pass pass HHLM5AFXY_n01_undetermined warn 0.0 fail 76.0 Sanger / Illumina 1.9 pass pass 76.0 Conventional base calls pass fail 25326224.0 pass warn warn 50.0 30.3235381979 HHLM5AFXY_n01_undetermined.fastq.gz fail pass pass HHLM5AFXY_n02_r4zt14tcs12 fail 0.0 pass 76.0 Sanger / Illumina 1.9 pass pass 76.0 Conventional base calls pass fail 6.0 warn fail fail 44.0 100.0 HHLM5AFXY_n02_r4zt14tcs12.fastq.gz pass fail HHLM5AFXY_n02_r4zt14tcs20 pass 0.0 pass 76.0 Sanger / Illumina 1.9 pass pass 76.0 Conventional base calls pass fail 2.0 pass fail fail 30.0 100.0 HHLM5AFXY_n02_r4zt14tcs20.fastq.gz pass warn HHLM5AFXY_n02_r4zt14tcs26 pass 0.0 pass 76.0 Sanger / Illumina 1.9 pass pass 76.0 Conventional base calls pass fail 1.0 pass fail fail 80.0 100.0 HHLM5AFXY_n02_r4zt14tcs26.fastq.gz pass fail HHLM5AFXY_n02_r4zt14tcs29 pass 0.0 pass 76.0 Sanger / Illumina 1.9 pass pass 76.0 Conventional base calls pass fail 1.0 pass fail fail 59.0 100.0 HHLM5AFXY_n02_r4zt14tcs29.fastq.gz pass pass HHLM5AFXY_n02_r4zt14tcs32 pass 0.0 pass 76.0 Sanger / Illumina 1.9 pass pass 76.0 Conventional base calls pass fail 1.0 pass fail fail 69.0 100.0 HHLM5AFXY_n02_r4zt14tcs32.fastq.gz pass fail HHLM5AFXY_n02_r4zt14tcs4 pass 0.0 pass 76.0 Sanger / Illumina 1.9 pass pass 76.0 Conventional base calls pass fail 1.0 pass fail fail 19.0 100.0 HHLM5AFXY_n02_r4zt14tcs4.fastq.gz pass fail HHLM5AFXY_n02_r4zt14tcs44 fail 0.0 pass 76.0 Sanger / Illumina 1.9 pass pass 76.0 Conventional base calls pass fail 3.0 pass fail fail 49.0 100.0 HHLM5AFXY_n02_r4zt14tcs44.fastq.gz pass warn HHLM5AFXY_n02_r4zt14tcs45 pass 0.0 pass 76.0 Sanger / Illumina 1.9 pass pass 76.0 Conventional base calls pass fail 2.0 pass fail fail 49.0 100.0 HHLM5AFXY_n02_r4zt14tcs45.fastq.gz pass pass HHLM5AFXY_n02_r4zt14tcs5 pass 0.0 pass 76.0 Illumina 1.3 pass pass 76.0 Conventional base calls pass fail 4.0 pass fail fail 59.0 100.0 HHLM5AFXY_n02_r4zt14tcs5.fastq.gz pass fail HHLM5AFXY_n02_r4zt14tcs52 pass 0.0 pass 76.0 Sanger / Illumina 1.9 pass pass 76.0 Conventional base calls pass fail 1.0 pass fail fail 47.0 100.0 HHLM5AFXY_n02_r4zt14tcs52.fastq.gz pass warn HHLM5AFXY_n02_r4zt14tcs58 pass 0.0 pass 76.0 Sanger / Illumina 1.9 pass pass 76.0 Conventional base calls pass fail 1.0 pass fail fail 40.0 100.0 HHLM5AFXY_n02_r4zt14tcs58.fastq.gz pass warn HHLM5AFXY_n02_r4zt14tcs60 pass 0.0 pass 76.0 Sanger / Illumina 1.9 pass pass 76.0 Conventional base calls pass fail 2.0 pass fail fail 43.0 100.0 HHLM5AFXY_n02_r4zt14tcs60.fastq.gz pass warn HHLM5AFXY_n02_r4zt14tcs61 fail 0.0 pass 76.0 Sanger / Illumina 1.9 pass pass 76.0 Conventional base calls pass fail 1.0 pass fail fail 48.0 100.0 HHLM5AFXY_n02_r4zt14tcs61.fastq.gz pass pass HHLM5AFXY_n02_r4zt14tcs68 pass 0.0 pass 76.0 Sanger / Illumina 1.9 pass pass 76.0 Conventional base calls pass fail 2.0 pass fail fail 42.0 100.0 HHLM5AFXY_n02_r4zt14tcs68.fastq.gz pass warn HHLM5AFXY_n02_r4zt14tcs69 fail 0.0 pass 76.0 Sanger / Illumina 1.9 pass pass 76.0 Conventional base calls pass fail 1.0 pass fail fail 55.0 100.0 HHLM5AFXY_n02_r4zt14tcs69.fastq.gz pass pass HHLM5AFXY_n02_r4zt14tcs76 pass 0.0 pass 76.0 Sanger / Illumina 1.9 pass pass 76.0 Conventional base calls pass warn 1.0 pass fail fail 46.0 100.0 HHLM5AFXY_n02_r4zt14tcs76.fastq.gz pass warn HHLM5AFXY_n02_r4zt14tcs82 pass 0.0 pass 76.0 Sanger / Illumina 1.9 pass pass 76.0 Conventional base calls pass fail 1.0 pass fail fail 65.0 100.0 HHLM5AFXY_n02_r4zt14tcs82.fastq.gz pass pass HHLM5AFXY_n02_r4zt14tcs84 pass 0.0 pass 76.0 Sanger / Illumina 1.9 pass pass 76.0 Conventional base calls pass warn 1.0 pass fail fail 53.0 100.0 HHLM5AFXY_n02_r4zt14tcs84.fastq.gz pass warn HHLM5AFXY_n02_r4zt14tcs85 pass 0.0 pass 76.0 Sanger / Illumina 1.9 pass pass 76.0 Conventional base calls pass warn 1.0 pass fail fail 61.0 100.0 HHLM5AFXY_n02_r4zt14tcs85.fastq.gz pass pass HHLM5AFXY_n02_r4zt14tcs90 fail 0.0 pass 76.0 Sanger / Illumina 1.9 pass pass 76.0 Conventional base calls pass fail 1.0 pass fail fail 52.0 100.0 HHLM5AFXY_n02_r4zt14tcs90.fastq.gz pass pass HHLM5AFXY_n02_r4zt14tcs92 pass 0.0 pass 76.0 Sanger / Illumina 1.9 pass pass 76.0 Conventional base calls pass warn 1.0 pass fail fail 57.0 100.0 HHLM5AFXY_n02_r4zt14tcs92.fastq.gz pass pass HHLM5AFXY_n02_r4zt14trps10 pass 0.0 pass 76.0 Illumina 1.3 pass pass 76.0 Conventional base calls pass warn 1.0 pass fail fail 57.0 100.0 HHLM5AFXY_n02_r4zt14trps10.fastq.gz pass fail HHLM5AFXY_n02_r4zt14trps18 pass 0.0 pass 76.0 Sanger / Illumina 1.9 pass pass 76.0 Conventional base calls pass fail 1.0 pass fail fail 13.0 100.0 HHLM5AFXY_n02_r4zt14trps18.fastq.gz pass fail HHLM5AFXY_n02_r4zt14trps20 pass 0.0 pass 76.0 Sanger / Illumina 1.9 pass pass 76.0 Conventional base calls pass fail 4.0 pass fail fail 21.0 100.0 HHLM5AFXY_n02_r4zt14trps20.fastq.gz pass warn HHLM5AFXY_n02_r4zt14trps34 pass 0.0 pass 76.0 Illumina 1.3 pass pass 76.0 Conventional base calls pass fail 1.0 pass fail fail 64.0 100.0 HHLM5AFXY_n02_r4zt14trps34.fastq.gz pass fail HHLM5AFXY_n02_r4zt14trps37 pass 0.0 pass 76.0 Illumina 1.3 pass pass 76.0 Conventional base calls pass fail 2.0 pass fail fail 58.0 100.0 HHLM5AFXY_n02_r4zt14trps37.fastq.gz pass fail HHLM5AFXY_n02_r4zt14trps42 pass 0.0 pass 76.0 Sanger / Illumina 1.9 pass pass 76.0 Conventional base calls pass fail 1.0 pass fail fail 51.0 100.0 HHLM5AFXY_n02_r4zt14trps42.fastq.gz pass warn HHLM5AFXY_n02_r4zt14trps52 pass 0.0 pass 76.0 Sanger / Illumina 1.9 pass pass 76.0 Conventional base calls pass fail 1.0 pass fail fail 6.0 100.0 HHLM5AFXY_n02_r4zt14trps52.fastq.gz pass warn HHLM5AFXY_n02_r4zt14trps53 fail 0.0 pass 76.0 Illumina 1.3 pass pass 76.0 Conventional base calls pass fail 1.0 pass fail fail 63.0 100.0 HHLM5AFXY_n02_r4zt14trps53.fastq.gz pass fail HHLM5AFXY_n02_r4zt14trps58 fail 0.0 pass 76.0 Illumina 1.3 pass pass 76.0 Conventional base calls pass fail 1.0 pass fail fail 56.0 100.0 HHLM5AFXY_n02_r4zt14trps58.fastq.gz pass fail HHLM5AFXY_n02_r4zt14trps60 pass 0.0 pass 76.0 Sanger / Illumina 1.9 pass pass 76.0 Conventional base calls pass fail 3.0 pass fail fail 28.0 100.0 HHLM5AFXY_n02_r4zt14trps60.fastq.gz pass fail HHLM5AFXY_n02_r4zt14trps68 pass 0.0 pass 76.0 Sanger / Illumina 1.9 pass pass 76.0 Conventional base calls pass fail 3.0 pass fail fail 26.0 100.0 HHLM5AFXY_n02_r4zt14trps68.fastq.gz pass warn HHLM5AFXY_n02_r4zt14trps76 pass 0.0 pass 76.0 Sanger / Illumina 1.9 pass pass 76.0 Conventional base calls pass fail 3.0 pass fail fail 41.0 100.0 HHLM5AFXY_n02_r4zt14trps76.fastq.gz pass warn HHLM5AFXY_n02_r4zt14trps78 pass 0.0 pass 76.0 Sanger / Illumina 1.9 pass pass 76.0 Conventional base calls pass fail 1.0 pass fail fail 47.0 100.0 HHLM5AFXY_n02_r4zt14trps78.fastq.gz pass warn HHLM5AFXY_n02_r4zt14trps84 fail 0.0 pass 76.0 Sanger / Illumina 1.9 pass pass 76.0 Conventional base calls pass fail 3.0 pass fail fail 39.0 100.0 HHLM5AFXY_n02_r4zt14trps84.fastq.gz pass pass HHLM5AFXY_n02_undetermined warn 0.0 fail 76.0 Sanger / Illumina 1.9 pass pass 76.0 Conventional base calls pass fail 25326224.0 pass warn fail 51.0 32.8915430943 HHLM5AFXY_n02_undetermined.fastq.gz fail pass pass