FastQCFastQC Report
Sat 25 Aug 2018
HHL33BGX7_n01_18_c_r_ev_col_h3k27ac.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHHL33BGX7_n01_18_c_r_ev_col_h3k27ac.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17765305
Sequences flagged as poor quality0
Sequence length76
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATGCCG24600.026.89593348
CGTATGC26750.025.51855346
GTATGCC29700.023.2202747
ATGCCGT28850.022.32701749
TGCCGTC33350.018.68471750
GCCGTCT30200.018.19916351
TCTCGTA52850.012.98317143
TATCTCG62450.011.88385141
CCGTCTT50600.011.83026652
CTCGTAT59850.011.34685544
TCGTATG61400.011.28855645
ATCTCGT68550.010.87760542
ACATTCC91000.09.80805532
TTATCTC101200.07.95602740
CACATTC116100.07.928647531
GTCACAT112200.07.86092129
CTGCTTG69150.07.845377459
CATTCCT124350.07.628053733
ATTCCTT131150.07.472783634
CCTTTAT132700.07.412834637
Produced by FastQC (version 0.11.2)