FastQCFastQC Report
Sat 25 Aug 2018
HHL33BGX7_n01_14_c_r_tga1_col_h3k27ac.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHHL33BGX7_n01_14_c_r_tga1_col_h3k27ac.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences36154853
Sequences flagged as poor quality0
Sequence length76
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[WARN]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGTATGC52650.017.81859446
TATGCCG54650.016.91093348
GTATGCC60000.015.81125947
ATGCCGT62700.015.18639249
TGCCGTC66500.013.8975450
GCCGTCT97050.09.88352551
TCTCGTA102700.09.40835143
CTCGTAT108400.08.94503644
TCGTATG112700.08.88331245
AGTCACG269400.08.50824770
TATCTCG127100.08.09765441
TCACGAG209750.08.04158270
ATCTCGT125100.08.03132942
CTCCAGT488600.07.81389870
GTCACGA243050.07.64531470
CAGTCAC367300.07.593357670
ACTCCAG537450.07.40318970
CCGTCTT142250.06.96451752
CGTCTGA1063900.06.874512770
TCTGAAC912400.06.80017270
Produced by FastQC (version 0.11.2)