HHJHYBGXB_n02_undetermined.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HHJHYBGXB_n02_undetermined.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	41636008
Sequences flagged as poor quality	0
Sequence length	55
%GC	64

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	11660781	28.006481793355402	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGTAGGCGCGCCGCTCTCTACGTTTA	146433	0.35169798218887843	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGAGTTGTGCTCAAAACTCAAGGTTT	92388	0.22189447172745286	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAGGGG	77317	0.18569743766020988	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAGGG	72874	0.1750263858148937	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGATCGTTTCCGCTTAACGGCGGTTT	49446	0.11875778292673976	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
ACTATCC	30615	45.919754	6
AGCAGTG	150250	45.7	2
AAGCAGT	152590	45.07251	1
TAGGCGC	19995	44.568554	32
CTACGTT	18950	44.419407	47
TCTACGT	19200	44.10122	46
CTATCCG	9655	43.99209	7
ATCAACG	158550	43.050987	11
GTATCAA	158570	42.761326	9
CATGGGG	123805	42.673737	25
GCCGCTC	20915	42.588333	39
CGCAGAG	162875	42.31047	16
GTACATG	157500	42.30375	22
GAGTACA	159815	42.220016	20
TACATGG	157975	42.126312	23
AGTACAT	159590	42.108986	21
AGAGTAC	160700	42.061256	19
CAGAGTA	162890	41.907017	18
ACATGGG	158130	41.82308	24
CAACGCA	163460	41.793655	13