HHJHWBGXB_n01_GFPStrep-StrepInput.fastq.gz FastQC Report

Summary

Basic Statistics
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Adapter Content
Kmer Content

Basic Statistics

Measure	Value
Filename	HHJHWBGXB_n01_GFPStrep-StrepInput.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	32939590
Sequences flagged as poor quality	0
Sequence length	76
%GC	44

Per base sequence quality

Per base quality graph

Per tile sequence quality

Per base quality graph

Per sequence quality scores

Per Sequence quality graph

Per base sequence content

Per base sequence content

Per sequence GC content

Per sequence GC content graph

Per base N content

N content graph

Sequence Length Distribution

Sequence length distribution

Sequence Duplication Levels

Duplication level graph

Overrepresented sequences

No overrepresented sequences

Adapter Content

Adapter graph

Kmer Content

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGTATGC	2405	0.0	9.313627	46
GGCGTTC	6265	0.0	6.4260607	5
GCACACG	13435	0.0	6.357021	70
GCGTTCC	6245	0.0	6.3345637	6
ACACGTC	10850	0.0	6.2585464	69
CGTCTGA	9220	0.0	5.884401	70
CACACGT	12330	0.0	5.6492586	70
GTATGCC	4285	0.0	5.6358	47
GATCGGC	7075	0.0	5.5918517	1
CACACTG	4100	0.0	5.463205	31
TCCGGTC	7430	0.0	5.3229475	10
CCGGTCC	7505	0.0	5.269706	11
GTTCCGG	7325	0.0	5.160948	8
TCTGAAC	9305	0.0	5.115923	70
TCGGAAG	28765	0.0	5.0986013	70
CCGTCTT	4370	0.0	5.0456414	52
CGGTCCA	8160	0.0	5.0182424	12