FastQCFastQC Report
Thu 13 Jun 2019
HHJHWBGXB_n01_5958-StrepChip.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHHJHWBGXB_n01_5958-StrepChip.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences30719516
Sequences flagged as poor quality0
Sequence length76
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATGCCGT48450.05.85126849
AGTCACG45250.05.80092428
GTCACGA53300.05.38444729
CGTATGC47000.05.28708646
TCACGAG57000.05.15773430
TATGCCG53100.05.141115748
Produced by FastQC (version 0.11.5)