FastQCFastQC Report
Thu 10 Sep 2020
HHH35BGXF_n02_1803_d12.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHHH35BGXF_n02_1803_d12.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1496
Sequences flagged as poor quality0
Sequence length151
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCCCTGGAAGTGCGTGACTTGGTGCACGAACAGGCTTGTTATGGAAATA20.1336898395721925No Hit
CCTCTGAACTGTCCCCACCATTGCTGGGTTATGCAGTGTATTTTATATTG20.1336898395721925No Hit
GGCCTGTACCCAGCAAGTAAGAAAATAACATGGACTTGAGGGTCGGGACC20.1336898395721925No Hit
TCGCAAGATAGACCAGAAGGTTCTGGAGAAACTGCCCAGTCTGATATTCC20.1336898395721925No Hit
CTCCACAGTGGGTCCTGAAGAGGCGGGGCTCTGGTCCCAGCTGTGGCTGG20.1336898395721925No Hit
GGATCACGGGAAAGCAGCTTGACCACCTCCATTTTTTAATGCAATAAATG20.1336898395721925No Hit
GGTTAAAGCCTCTGCCTTCCGCTCAGGTCCTGATCCCAGGTCCTGGGATC20.1336898395721925No Hit
CTATAAGCAGGGCTCACAAAGTTAGTGGCCCTCAGGTAAAGAGAACAGAG20.1336898395721925No Hit
TCTTACACTTTAATATGCATATCATTTGCCTGGGGATATTGGTAAAATGC20.1336898395721925No Hit
AAAGATTATCTGAGATCATGGGAACCTGAAAGGCATTTGGGTTAGTTTTC20.1336898395721925No Hit
GTTTAACCTTGGTCTTGAATAAAACAAAATATTACACTAACTTTTTTATG20.1336898395721925No Hit
CACTGTGAACAGGATCCCCTCCCTCTGGTCCTGGGGAAGGCTGGGTCTCA20.1336898395721925No Hit
CAATTATCATTAAGAAATTGTACACGCAGGTCATAATTATTACTAGGATT20.1336898395721925No Hit
GCTTCCATGTGGGTCAGTGAAGGAGCGGAACAAAAATTGACACGGGGACA20.1336898395721925No Hit
ATAAAGACACTGTTCTCATTCATGAAGTCTTTATCTCATGACCTATCGCC20.1336898395721925No Hit
CCATTACCTCTACCTGCAGAACAACTTCATAACGGAGCTCCCCGTGGAGT20.1336898395721925No Hit
TAATTATCCTTGGGTCAATTAGATATAACTCTTTTACAAATTGATTTCGG20.1336898395721925No Hit
GTCTTTTGCACTCTAGCATATTATAGTATTCAAGTTCTCTGAAGCTGGTA20.1336898395721925No Hit
CCTTGGGGGGCATCTTCCTCAGGATATTGTGGGCCAGGTTGAGCTGCATG20.1336898395721925No Hit
CCCAGGCACCCCTATCCCTATAAAATCTTGGTAGCTTCAGAATCCAGGTT20.1336898395721925No Hit
CCACTATACCACCAACGCAGATGACAATATCCTGAATTAGGTTGGCGGTA20.1336898395721925No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)