HHH35BGXF_n01_Chang_03.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HHH35BGXF_n01_Chang_03.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	23946
Sequences flagged as poor quality	0
Sequence length	151
%GC	40

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AGCACGCACTTTCTTAAAATGTCGCTGTTTGGAGACACAATTGCCTACCT	63	0.26309195690303183	No Hit
GTAAGAAGTACAGTAAAAATTGAATTTAATGCGATTTTTCTACCTCCAAA	53	0.2213313288231855	No Hit
GATATACAGAAAGCACTAATTGGTGCATCTATCTGCTTTTTAAAACCCAA	47	0.1962749519752777	No Hit
GTAGTAACAAGAGCATTTTTCAATAACGTTTCTTTGTAATGATGACAAGC	43	0.17957070074333917	No Hit
GGTCATATGCATTCAATCTATGCAGAGTTGATAAGGACTTGTATCCATTG	35	0.1461621982794621	No Hit
GTATTAAGGGACATGAACAACAAAGATGCAAGGCAAAAGATAAAGGAGGA	32	0.13363400985550822	No Hit
CAATTACTATGTGGTCACTCAATACCTCCATGTTGTCAGAGAGTACTTCC	32	0.13363400985550822	No Hit
GAGCCATACTGTATGAAAAGTTCCTCAAATAGCAACTGTCAGAAATACAA	31	0.12945794704752359	No Hit
GTATTTACACAGTCTCTCCAAAGCTTCCATAGGAAATTTTCGTTAGCTTT	31	0.12945794704752359	No Hit
GTGTGAATGTGATGCTTGTTTCTCGCACAAAGCACAGAGCGTTCCTAGTT	28	0.1169297586235697	No Hit
GCTATGAACACAGCAAAAACAATGAATGGAATGGGAAAAGGAGAAGACGT	27	0.11275369581558506	No Hit
ATTACTATGTGGTCACTCAATACCTCCATGTTGTCAGAGAGTACTTCCTT	26	0.10857763300760044	No Hit
GTATAGTATGGTTATCCAATCCATCATCATTTAAAGATGCAGCAGTAATG	26	0.10857763300760044	No Hit
GTAAAAGGATGTCTCTTGAAGAGAGAAAAGCAATTGGAGTAAAAATGATG	25	0.1044015701996158	No Hit
GTATGAAAAGTTCCTCAAATAGCAACTGTCAGAAATACAATTGGACCGAT	25	0.1044015701996158	No Hit
CATTCACACAGGGCTCATAGCAGAGCAGCGAGATCTTCAGTGCCCGGAGT	25	0.1044015701996158	No Hit
GTATTGTCTCATGGTCATGTACCTGAATCCTGGAAATTATTCAATGCAAG	24	0.10022550739163118	No Hit
GGAATGGTATGTGTCAGTATATGCTTCTCCATATTTTATTTTGAGCAATG	24	0.10022550739163118	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTAACAA	25	9.2742365E-4	87.0	4
AAGTACA	35	3.3689525E-5	82.85714	6
GTACAGT	35	3.3689525E-5	82.85714	8
GAAGTAC	40	6.531119E-5	72.5	5
TAGTAAC	30	0.0019126254	72.5	2
CCCTTAC	30	0.0019126254	72.5	1
TAACAAG	45	1.1702631E-4	64.44444	5
GTAAGAA	45	1.1702631E-4	64.44444	1
CTTACTC	35	0.0035240687	62.142857	3
TAAATAC	40	0.005979157	54.375	4
GATGTAA	40	0.005979157	54.375	2
AGTAACA	40	0.005979157	54.375	3
AAGCACA	40	0.005979157	54.375	5
TAAGAAG	55	3.1557473E-4	52.727272	2
TCCCATG	45	0.0095252935	48.333332	8
AGTACAG	60	4.8481883E-4	48.333332	7
CTGCAAA	45	0.0095252935	48.333332	145
TTACTCC	85	5.1860494E-5	42.647057	4
GTAAATA	85	5.1860494E-5	42.647057	3
AACAAGA	80	0.0019971686	36.25	6