FastQCFastQC Report
Mon 14 Sep 2020
HHH35BGXF_n01_1805_d08.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHHH35BGXF_n01_1805_d08.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences118
Sequences flagged as poor quality0
Sequence length151
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTAGAGCATGCGACTCTTGGTCTCAGGATTGTGAGTTCGAGCCCCATGTT10.847457627118644No Hit
GATCACAAGTAGGCAGAGAGGCGGGCAGCAAGAGCAGGGGAAATAGGTTC10.847457627118644No Hit
ATCTCAGGGTAATTATTCCCTCCCGCTCCATCCATGTTGTTGCAAATGGC10.847457627118644No Hit
GGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCG10.847457627118644No Hit
CTACCTGGGTCGTTAATAGATCAGGTTGCCAACTACCGACAAGGTAAATG10.847457627118644No Hit
CCTAGTACGAGAGGACCGGAGTGGACGCATCACTGGTGTTCGGGTTGTCA10.847457627118644No Hit
GGTAAATGGAAAGAAATAAGAAATAGGCAATCAATGGGAATACCAAAAAA10.847457627118644No Hit
CACCAATCACATTGGATTAGGGCCCACCCAATGACCTCATTTTAACTTAA10.847457627118644No Hit
CAGCAACAAAGTAATGACTCTTGTGGGGGAAATCGATTAAAGCGGTGCTA10.847457627118644No Hit
GACTCTGATTTCCCAGTGAATGCTATGCTTTCACAGAGCTTTTCAGCTTG10.847457627118644No Hit
TAGAGATATCTTTGTCAGAATTGCATTGTGAGCCTCTCCTAGTAAACTGA10.847457627118644No Hit
CGCCGAAGGGGTTTTGGCGGATGAGAGAAAGATTTTCAGCCTGATACAGA10.847457627118644No Hit
ATACTCCTCTCAAGTGCCCCTAGAACGTTCTCCAACTTAGGTCATATGTA10.847457627118644No Hit
GAAGTTGGATTTGTTCCTACAGCTCAAGATTGATCTATGGCCTCAGCGCC10.847457627118644No Hit
GGATCCATGCTGAGCAGAGAGCCCGATGTGGGGCTTGATCCCAGGACCCT10.847457627118644No Hit
GAGTTCCTCCCCTTCCTCATGCCGTGAGCGGCGAATACTAATAACCATTT10.847457627118644No Hit
CTCTACAACTTCCTTCTTCTTCTGAATAATGTATCATCGTGTTGTACCCA10.847457627118644No Hit
ATGGTGGATGGCCTGATGTCTTACTGCTCCAAGAGCGGCCTATCAGTCAG10.847457627118644No Hit
GTGAGGCATTTCAATCCATCGTAGTCCTAGAAACAGAAAGTAGAATGGTG10.847457627118644No Hit
CAGAAGATCACAACGGAAACATCAGCCTCAGACAACCCCTTACTTGGATG10.847457627118644No Hit
ATACTAACGTATGCTTCCTAGAATGAGAAGGAAGAAAATGAATACAGAAG10.847457627118644No Hit
AGATAAATCTGATAAAAAGTACAAGTAATATTGGTCTATTAAATATATAT10.847457627118644No Hit
ACCCTGAGATCATGACCTGAGCTGAAGGCAGAGGCTTTAACGCACTGAGC10.847457627118644No Hit
GGTCTAGGTACATACCAATAGAAAAGCTGCATTCATCCTCCAGAAGACAT10.847457627118644No Hit
CAATTGTTCTCTCCACTTTCCGTTTCTGTTTTGGAGGGAGTGGAGATCTC10.847457627118644No Hit
GTCCAGTGTGGAACCTGATGTGAGCTGGATCCCATGACCCTGAGATCATG10.847457627118644No Hit
TTTCCCAACGAACGCTATGCTTTCGCAGAGGAGATGCCCAGGCAAAGAGG10.847457627118644No Hit
TGTCTTAGGTAGAGGCTTAGCCCCAAAACAAAATAGTTTCCTTGGCTCAA10.847457627118644No Hit
CAAGAGGACTTAGCCAGGGAGGCTTCCTGGAGGAAGCAGAGGATAGGGGT10.847457627118644No Hit
GTATCAGGCTGAAAATCTTCTCTCAATCCGCCAAAACAGCTTCGGCGTTG10.847457627118644No Hit
ACAACCAAAAGAGAAATATCAAAATGACAACAGTAAGACCTTCCCCATCA10.847457627118644No Hit
TTTGGAACGTGTGAGGCCTTTTGCTGGCACTCCCTTACGGAGGCTGTTTA10.847457627118644No Hit
CTCCTGCTAGAGTCAAAGCAGGTGCCACTTTGTAGCCTGAACAGCAGTTT10.847457627118644No Hit
CAGGAATACAGATTCTAGGATTAAGGGTCAGTTTAATAAAGGGTCAGTTT10.847457627118644No Hit
TTTGGACACAATGCAGAAAACACGAACCACAGAGGGGGAGAATGACCAGT10.847457627118644No Hit
TATCTGCAACGACCCTCTTTCCAAATAAGGTCACATTCCGAGATTCCTGG10.847457627118644No Hit
ATCCTAGAATCTGTATTCCTGAGGATTACTATCCGTTGGCAAGTAAACTG10.847457627118644No Hit
GCGCTACGGCCGCCAGGCAAATTCTGTTTTATCAACACGTCCTGTTCTGA10.847457627118644No Hit
GAGTGGAGAAAGAGAGAGAGGCCTGCATGCTCCTTTCCTGCTTGGAAAAT10.847457627118644No Hit
AGGCTAGGTAGCCATTATCAATTCTATCAACTTCCCAGTTCTGTACAAAT10.847457627118644No Hit
GCACAGGGATGGGGTTCATCAATGTTTCTTTTTCTAATTTCTGTTGTTTT10.847457627118644No Hit
ATAGTAAGTTAGCTCAGAATGCCCTAACAAAGTACCGGGACTGGCTGGCT10.847457627118644No Hit
GCGAAAGCAGGCGGAATGGCTGTGCTCAAGGGAGGCGGGATCAAGGAGTT10.847457627118644No Hit
GTCCAGATCCCTCCCACTGGTAGGGGCACAAAGCCCCAGACCCTGGGCTG10.847457627118644No Hit
GGTAGGGCCAAGAGCAATCAGATGCAGACTCTGTTTGCTAACCCGGATTC10.847457627118644No Hit
ATACTAGAGGATGATTGTCTTAAGCCCTGTGTTGCTAGTCTCCTTGTCAG10.847457627118644No Hit
GGTATACAAAGTCAAGAGATCTACCATAAAAGGGACCAAGATATGTGAAG10.847457627118644No Hit
TTGATAGGCCGGGTGTGTAAGCGCAGCGATGCGTTGAGCTAACCGGTACT10.847457627118644No Hit
TGTTAATTCTTTCTTCTGCATTCCTGTTTAGCCTGTAGCTACACCCATGA10.847457627118644No Hit
CAACAGCCGCATCCAGAGCCAATTTGCTATGCTGTGAAGCAGGATCACCC10.847457627118644No Hit
TACTGGAACAATGAGAACAGAGAAGGAAGTGTAAGAATGATAAGCATCTG10.847457627118644No Hit
GTGTCTGGTTTGTTTCACTTAGCATAATGTCCTCAATGTTCATCCACATT10.847457627118644No Hit
GTGAAGTACGGTCTGCAAGTGTTGATGAGGCAAGAGAGGAAGACACCGTG10.847457627118644No Hit
ATTCCATTGAGACGATGGATAAAAACACGTTCAGCTAATGTACAGTGATA10.847457627118644No Hit
ACCATCTTCTAAGGCAAATTCAAAACTGCTGCCAGTTTGATTTCTTTTCC10.847457627118644No Hit
CGCTACGGCCGCCAGGCAAATTCTGTTTTATCAACACGTCCTGTTCTGCC10.847457627118644No Hit
CTACGTATACAGTTTGTATACGTAGGAGGTGAAGGGGATCAGTCTTTGTA10.847457627118644No Hit
GTAAAAACATTTACAATTTACAATTGGAACAGACAATAGATTAAAAAGCA10.847457627118644No Hit
TAATAATCCAACCCAAGGAGGGGTCATCAGGACTTTACAGCCAGTGGGTC10.847457627118644No Hit
GAAGAAAAGTGTTTAAAATATAGATGTTACATTCATGAAATAACATAATG10.847457627118644No Hit
ATCCAAAGGCAGATGCTTAACTGACTGAGCCACCCAGAATGTTGCTTTTC10.847457627118644No Hit
CATCACTGGTGTTCGGGTTGTCATGCCAATGGCACTGCCCGGTAGCTAAA10.847457627118644No Hit
CTCCTAATATCATCCTCGGGATCTATTCTCGTGGCTTCTCTCCCCTTGCA10.847457627118644No Hit
GTGCCATACCTTGGCCCTGGCCCCCTCCCCACAGTGTTGTATTGATGATG10.847457627118644No Hit
CTCTCATCCGCCAAAACATCTTCGGCTTTGTAAGGTTAAGCCTCACGGTT10.847457627118644No Hit
GTGCCAGATATCAAACATGGGAAGGCTTAACTTAATTCTGGATAAAAACC10.847457627118644No Hit
ATATTTACCAGTTGTCCCTTTCCAGAGAACTTTACCGACCCCTGATTTAG10.847457627118644No Hit
GTTTACAGTCATTTTCCAGCCTACAGCCTTGAAGAAGGAGAATCTGGACA10.847457627118644No Hit
GAGAGAGAGGAGAGAGAACACGAGTGAGGAGAGGGGAGAGTTGGAGGGAG10.847457627118644No Hit
CTTCAGAGACACCCTCTTTAGCCAGCCTGGAAGTTCATGGAAAGAAATAT10.847457627118644No Hit
TCACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACTTCATTACCGGG10.847457627118644No Hit
GCCAAGTGCTCTCATCTGTCAAATGGAATGCTAACTAGTTTGAGGATGCC10.847457627118644No Hit
ACATTATTCCAAAAGGAGATTCCAGAAGTCCAGACTCCCAGGCTAGTCTT10.847457627118644No Hit
GCATAAACTGCTTATCAGAAAGTGATACAGCAGTGGTGTGCAAACAGGAA10.847457627118644No Hit
AAATGGATCACTGGGGCTCCTGAGTGGCTCAGGCAATTAAACATCAAACT10.847457627118644No Hit
GAGGATGCGGCTCGGCGCCCGGCAAAGAGGGAGCCCACACTGGGTACTGG10.847457627118644No Hit
TTCTAGGGCTTAGCTGCTTGGATCACAAGGCCAATGAAAGAAATGCTTCC10.847457627118644No Hit
CTTTTGAACCTTTTTATGCTTTTGACATTTAGTTCTCAAGCTCCCTGGTA10.847457627118644No Hit
CTTCAGAAACGTGCTTCAGAACATCACAGGGGAAAATCCACGCAACCGGA10.847457627118644No Hit
AGCGAAAGCAGGACGGATAAGCAAGAGTAGGCTGGAGCAAACGCGCCAGC10.847457627118644No Hit
GTACATGAACCCGAAAATGGTCAGCTGTCATTATCAGGGCTGTATTATAA10.847457627118644No Hit
CACCCAGACTCACCAACATACGGATGCGAAGATCAATAACCATATGCTTT10.847457627118644No Hit
GTCTATATCTGCCCCCCTAAAATGCCCAGGGAGTGAGTGCCCGGGCACAG10.847457627118644No Hit
GTACATCAGCTAAATAGAATGTTGAGAGTAGCTCCATCATCACAATCTTC10.847457627118644No Hit
CTTGAAGGGTGGATTTCAAATCATTTTTAACAACACGGCACTTCTTTCAA10.847457627118644No Hit
CTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACT10.847457627118644No Hit
CCTGTTATGTGACCTTGGACAAGCCACTTAGTCTCACATCCCCATCTATA10.847457627118644No Hit
GGTTTGGAAGGGTATCAGGCTGTCCCCCAGGGTAGGTCGAGGAATCAGAA10.847457627118644No Hit
ACTCAAGGTCAAGTATCTGAATAACTAGCAGGAGTTGCTCTCTCTGAGTA10.847457627118644No Hit
TTCTAGTTCTATACCACTGTGGTTGGAAAAGATGGTTGATTTGATTTCAG10.847457627118644No Hit
ATTAATAAAGTGATCACACTTGCATCAGATGTTAAACATTTATCCCTGTC10.847457627118644No Hit
GAATAGACGATTTCTTCTTGACAGCTCTTCATGTCAGTCAAAAGTCTAGG10.847457627118644No Hit
GTTATTAAGTGTCTCAGATGAACTACAGGTAACCAGAGTTCCTTTTATTC10.847457627118644No Hit
ACCTTAAGGAGCTTCAGTGTAGAAAAGATATTTAAAAAATCATTACATGA10.847457627118644No Hit
GTTCAGCTGTCTACTAATGACCAGTAGAGAGCTTAAATAAGAAATCAAAA10.847457627118644No Hit
CCTAATATTAGGGGGCAAGAGCATTAGAGGGCCAGCCCAGGGGCTGCAGT10.847457627118644No Hit
GTATTAGAAGTCCTAGCAACAGCAATCAGACAACAAAGAGAAATAAAAGG10.847457627118644No Hit
ATCTTTTCTCTGTGCCGACTTCTTTCCTTGAAGTTGAGATTCCTTGGAAT10.847457627118644No Hit
GTGGATTTCAAATCATTTTTAACAACACGGCACTTCTTTCAAATACATGC10.847457627118644No Hit
AGGGAGAACTCATCTCGGGGCAAGTTTCGTGCTTAGATGCTTTCAGCACT10.847457627118644No Hit
TTCCCTGCCCCCTCAAGCTCTCTGCTGGACCCAAGCTCTAGAAAAAACAG10.847457627118644No Hit
GAGCCAGAAGGAGGGATATCAGTCCAGGACCCTGAGATGGAGACCTGAGC10.847457627118644No Hit
AGCAGGTGATAGGGAACTGTTTACTGTTACTGATCACCTGCCAGGTGGCA10.847457627118644No Hit
GCAGAGAGGCAGGCAGAGAGAAAGGGAAGCAGGCTCCCTGCGGAGCAGAG10.847457627118644No Hit
GAAACAGACTGAGGCACAGAGAGATAGGAATAATGTACCTGACATCACAC10.847457627118644No Hit
AAATAGGAAACACTCGAGGTTCACTACAATTTGTCCTTATTCCAAAATAG10.847457627118644No Hit
CTATAAGATTTCATTTTTTTAAAAAACTTAATTTAAATTTTAAAATTTAA10.847457627118644No Hit
CCACCAAGCACCCGGCCCTGAACTCGCAGAAACCCCTCCTGGAGGAACGG10.847457627118644No Hit
GTGATGAACATAAACATAAAAATCCTCACCCAAATATCTGCAAACCAAAT10.847457627118644No Hit
CATTTCAGACTTCTACTCTCCAGAAATGTGAGACAGTTTCTGTTGCTTTA10.847457627118644No Hit
CTCTACAGTTCTCCTTTAAGGAGACTTTTTAAAAATGATGCAGGCTTTGT10.847457627118644No Hit
CCTATAAATCACTACTTCCCCTTTTAGCCCAGCCTATCCCTGGCCTGGGA10.847457627118644No Hit
GCACTTATCTCTTCCGCATTTAGCTACCGGGCAGTGCCATTGGCATGACA10.847457627118644No Hit
GGCATATTTTGACCAGGTCTGCTTGTAGAAATATCACTCCAGCTGCAATG10.847457627118644No Hit
CTCATAGACAAGACATATGTACCTTATGCTTACTGCAGCATTATTTACAG10.847457627118644No Hit
GGGTTCAGAGATGCATATGTATTGAATGGGTTAAGAGGCCAGAAGAGCAG10.847457627118644No Hit
TGATTAGGCAGACCGTGGCACTAGTAACAGAAATAGGAGGAAGAACCGGT10.847457627118644No Hit
GGGGATCAGGATTTCCCTCTAGAACATTGTGCCCAGCCAATTTATCAACG10.847457627118644No Hit

[WARN]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)